| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4575 |
|---|
| Symbol | tig |
|---|
| ID | 5155202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4794623 |
|---|
| End bp | 4795981 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640559375 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001240510 |
|---|
| Protein GI | 148255925 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.136212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCA CAGAAACCTT GTCGGAAGGC TTGAAGCACG AGTTCCAGGT CAGCGTCCCC
GCGGCCGATC TCGACGCCAA GGCGGATGCG AAGCTGGTCG ACCTGAAGGA CAAGGTCCGC
ATCAACGGCT TCCGCCCCGG CAAGGTGCCG GTGGCGCATC TGAAGAAGAT CTACGGCAAG
TCGGTCATGG CCGAGACCAT CGACCAGACC ATCCGCGACA CCAACACGCA GATCTTCACC
GAGCGCGGCT TCCGTCTCGC CACCGAGCCG AAGGTCACCA TGCCGACCGA GGAGGCCGAG
GTCGAGAAGA TCCTCAGCGG CCAGTCGGAC CTCACTTACA CGGTGGCCGT CGAGGTCGTG
CCGGCGATCA CGCTCGCCGA CTTCAAGACC TTCTCGGTCG AGAAGCCGGT CGCCGACATC
ACCGATGCCG ATGTCGATGA GGCGATCAAG CGTCTGGCGG ACGCCAACCG CAGCTATGCG
GCCAAGGCCG AGGGCGCCAA GGCTGAGAGC GGCGATCGCG TGAAGGTCAA CTTCAAGGGC
ACGATCGACG GCGTGGCGTT CGACGGCGGC ACCGGCGAGG GCATCGACGT CGTGATCGGC
TCGAACACCT TCATCCCCGG CTTCGAGGAT CAGCTGATCG GCATCGGCGT CGGCGAGACC
CGGACGCTCA AGGTCGCGTT CCCGAAAAAC TATCTGAACA ACGATCTCGC CGGAAAGGAC
GCCGAGTTCG AGACCACCGC GACCGCGATC GAAACGCCCG AAGAGAAGGT CGTCGACGAC
GAGTTCGCCA AGACGCTGGG TCTCGAATCG CTCGACAAGC TGAAGCAGCT GATGCGCGAC
CGCCTCGCCG GCGAGTTCAA CCAGGCGACC CGCCAGCGCG TGAAGCGCGC GCTGCTCGAT
CGCCTCGACG AGACGCACAA ATTCGATGCG CCGCCCTCGC TGATCGACGA GGAGTTCAAC
CTGATGTGGA ACTCGGTGAA GGCCGAGATG GACTCCAGCG GCAAGACATT CGCCGACGAG
AACACCACCG AGGAGAAGGC GAAGGAGGAG TATCGCACCA TCGCCGACCG TCGCGTGCGG
CTCGGCCTCG TGCTGTCGGA GATCGGCGAG AAGAACAAGA TCACCGTGAC CGATGACGAG
GTCAGCCGCG CCGTGATCGA GCGCGCGCGC TCGATGCCGG GCCGCGAGAA GGAGGTCTGG
GACTTCTACC GCAGCAACCC GCAGGCGCTC GCGCAGCTGC GGGCCCCGAT CTACGAGGAC
AAGGTCGTCG ACTTCATCCT CGAGCTCGCC AATGTCACCG AGAAGAAGGT CTCCAAGGAC
GAGCTCTTCA AGGATGATGA GAACGACAAG GCGGCCTGA
|
|---|
| Protein sequence | MQVTETLSEG LKHEFQVSVP AADLDAKADA KLVDLKDKVR INGFRPGKVP VAHLKKIYGK
SVMAETIDQT IRDTNTQIFT ERGFRLATEP KVTMPTEEAE VEKILSGQSD LTYTVAVEVV
PAITLADFKT FSVEKPVADI TDADVDEAIK RLADANRSYA AKAEGAKAES GDRVKVNFKG
TIDGVAFDGG TGEGIDVVIG SNTFIPGFED QLIGIGVGET RTLKVAFPKN YLNNDLAGKD
AEFETTATAI ETPEEKVVDD EFAKTLGLES LDKLKQLMRD RLAGEFNQAT RQRVKRALLD
RLDETHKFDA PPSLIDEEFN LMWNSVKAEM DSSGKTFADE NTTEEKAKEE YRTIADRRVR
LGLVLSEIGE KNKITVTDDE VSRAVIERAR SMPGREKEVW DFYRSNPQAL AQLRAPIYED
KVVDFILELA NVTEKKVSKD ELFKDDENDK AA
|
|---|
| |