Gene BBta_4552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4552 
SymbolnuoJ 
ID5150311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4772428 
End bp4773066 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID640559352 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001240489 
Protein GI148255904 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.872024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.129927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTC CTGCGCTCTT CTTCTATCTG TTCGCGGCGG TCTGCGTGGC CTCGGCCGTG 
ATGGTGATCG TCTCCAAGAA CCCCGTTCAC TCGGTGCTCT ATCTGATCCT CGCTTTCGTC
AACGCCTCCG GCCTGTTCGT GCTGATGGGC GCCGAGTTCC TGGCGATGAT CCTGGTCGTC
GTCTATGTCG GAGCGGTCGC GGTGCTGTTC CTGTTCGTGA TCATGATGCT CGACGTCGAC
TTCACCGAGC TGCGCGAGGG CTTCCTGCAA TACATGCCGA TCGGCCTGGT GATCGGCGGC
ATCTTCCTGT TCGAGCTGCT GCTGACGGTG TCCTACTGGG TCATCAACCC GACGACGCCG
AAGGCGATCA CGGCGGCGAT CCCGACCAAC GTCACCAACA CCGAGGCGCT CGGCCTCGTG
CTCTATACGA AGTACATCCA TTACTTCCAG CTGTCGGGCA TGATCCTGCT GGTCGCGATG
ATCGGCGCCA TCGTGCTGAC GCTCCGCCAC AAGGTCAGCG TCAAGCGCCA GGACATCAAC
GTCCAGAACG CCCGTACGCC GGAGATGGCA ATGGCGGTGC GCAAGGTCGC GGTCGGACAG
GGGCTGCAGG ATACGGACGC CGCGGAGTGG GTGAAATGA
 
Protein sequence
MILPALFFYL FAAVCVASAV MVIVSKNPVH SVLYLILAFV NASGLFVLMG AEFLAMILVV 
VYVGAVAVLF LFVIMMLDVD FTELREGFLQ YMPIGLVIGG IFLFELLLTV SYWVINPTTP
KAITAAIPTN VTNTEALGLV LYTKYIHYFQ LSGMILLVAM IGAIVLTLRH KVSVKRQDIN
VQNARTPEMA MAVRKVAVGQ GLQDTDAAEW VK