Gene BBta_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4450 
Symbol 
ID5155656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4659214 
End bp4660269 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID640559255 
Productbranched chain amino acid ABC transporter permease 
Protein accessionYP_001240392 
Protein GI148255807 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0565603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGC ACGTCCGTCT CGCTCTCCAG GCGGCAGGAA TCCTGCTGGC GATCGTCGCC 
ATCGCGGTCG TACCCAGCGT CATCGAGCTG TTCGCGCTGA TGCAGCTGAC CTTGTTTGCG
GCGATGGCGG TGCTGGCGCT GAGCCTCGCC TTCATCTGGG GCTTCGGCGG CATCCTGTCG
TTCGGCCAGA CCGCCTTCTT CGGCCTCGGC GGCTATGCCT ACGCCATCGC GGCGGTCAAC
TTCCAGGACT CGACGCCGGC GATCCTGCTG GCGATCGCTG TCCCCGCTTT GTTCGCCGCG
ATCCTCGGCT ATTTCATCTT CTTCGGCCGC ATCTCGGACG TCTATCTCGG CGTCATCACG
CTCACCGTCA CGCTGATCCT GTTCAACTCG GTCAACTCGA CCTCGGGCGA TGCGTACAAG
ATCGGTAAGG CGCTGCTCGG CGGCTTCAAC GGCATGCCGG CGGTGCCGAC CTTCAACGTG
CCGTTCGATC CGTCGACGGT GCTGTCGCCG GAGCAGTCAT GGTGGACCAC CGCCGGCGTG
CTGCTCGCTG TGTTCCTGAT GCTGCGCCTG CTGCTGGCGC TGCCGGCAGG GCGCGTCATC
GTCGCCGTGC GCGAGAACGA GGTGCGGGCC TCGCTGCTCG GCTACGACCC GCGGCTGGTG
AAATGCCTGA CCTTCATCCT CGGCGGTGCC ATCGCCGGCC TTGCGGGCGC GCTCTACGTC
AATTGGGGCG CCTTCGTCAG CCCGACCATC TTCAGCCTGT CGCTGTCGGC GGAGATCATC
ATCTGGATCA CGGTGGGCGG TCTCGGCACC TTGCTCGGCC CGATCATCGG CTGCGTCGTG
ATCGAGTACA TCGTCGCCTA TATCGGCTCG CAGCAGCTCT TGAACTCCAA TCTCGTGCTC
GGCGGCGTGC TCGTCATCTT CGTGCTGCTG CTGCCGAAGG GCATCGTACC GACCGCGCGC
GATCTGGTGC TGCGGCTGAT GCCGCAGAAC AAACCGAAGA CCAACGGTCC GCCGGTGCAA
TCGGCGGCGG CGCCGCATCC TGCAGGAGCC GAATGA
 
Protein sequence
MPKHVRLALQ AAGILLAIVA IAVVPSVIEL FALMQLTLFA AMAVLALSLA FIWGFGGILS 
FGQTAFFGLG GYAYAIAAVN FQDSTPAILL AIAVPALFAA ILGYFIFFGR ISDVYLGVIT
LTVTLILFNS VNSTSGDAYK IGKALLGGFN GMPAVPTFNV PFDPSTVLSP EQSWWTTAGV
LLAVFLMLRL LLALPAGRVI VAVRENEVRA SLLGYDPRLV KCLTFILGGA IAGLAGALYV
NWGAFVSPTI FSLSLSAEII IWITVGGLGT LLGPIIGCVV IEYIVAYIGS QQLLNSNLVL
GGVLVIFVLL LPKGIVPTAR DLVLRLMPQN KPKTNGPPVQ SAAAPHPAGA E