| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4403 |
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| Symbol | |
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| ID | 5153128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4616212 |
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| End bp | 4617078 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559211 |
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| Product | putative phytoene synthase (terpenoid synthase) |
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| Protein accession | YP_001240348 |
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| Protein GI | 148255763 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0617477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.124471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA CCAGCGCCAG CACCGACGCT GCGTTCTGCG CCAGCCTCGT CCGCGAGCAT
GATTTCGATC GTTACGCGTC GACGCTGTTC GTTGCGCCGG AGATCCGGCG TGCGTTGCTG
TCGCTCTACG CCTTCAATGT CGAGGTAACC CGGATTCGCG ATGTCGTGTC ACAGCCGCTG
CCGGGCGAGC TACGCCTGCA ATGGTGGCAC GATACGCTGA CAGGCCAGGA ACATGGCGGT
GTCGAAGGCA ATCCCGTCGC CGCTGAACTG CTGTTGACGG TGCAGCGCTT CGCCCTTCCG
GTCGATCGCC TCACACGCCT GATCGACGAG CATCAGTTCG ATCTCTACAA CGATCCGATG
CCCACGATGG CCGCATTGGA TGGCTATCTC GGCGACACGC GCGGAGCGCT GTTCGCGCTG
GCTGCACGGA TCGTCGTTGG CGCGGTGGCC GACATCGATC ATCTCGCTCA TCATGCCGGA
CTTGCCCAAG GCATCCTGCA CCTGATCGCC TCGTTGCCCC GGGATGCCGC CCGCCGGCAG
TTGTTCATTC CGCTCGATCT CCTCGCCCGG CATGGGCTCG GCCAGGAGCA GGTGTTCGCT
GCCAAGGCCA CGCCGGTGAT CCGGGCCATG CTGGCCGAGC TGCGTGGGCA GGCCCGGCAG
CATCTCGATC ACACGCTGGA ACTGGCGCGC GAGGCGCCAG GCGGCGTGCG ACCGGTGCTG
CTGCCGCTCG CGCTCGTCAG CCGCGATCTG GTGCGGGCGG AGCGCCGCAT CGACGCCGAT
CCATTCCAGC CGCAGCTCCG CTCGCGTCTG GCAACGCTCT GGACGCTGTG GCGCGCCGCG
CGATCGCCGG CCTTTCGGGA GCGCTGA
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| Protein sequence | MSETSASTDA AFCASLVREH DFDRYASTLF VAPEIRRALL SLYAFNVEVT RIRDVVSQPL
PGELRLQWWH DTLTGQEHGG VEGNPVAAEL LLTVQRFALP VDRLTRLIDE HQFDLYNDPM
PTMAALDGYL GDTRGALFAL AARIVVGAVA DIDHLAHHAG LAQGILHLIA SLPRDAARRQ
LFIPLDLLAR HGLGQEQVFA AKATPVIRAM LAELRGQARQ HLDHTLELAR EAPGGVRPVL
LPLALVSRDL VRAERRIDAD PFQPQLRSRL ATLWTLWRAA RSPAFRER
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