Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4399 |
Symbol | |
ID | 5153104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4611751 |
End bp | 4613148 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559207 |
Product | tRNA (uracil-5-)-methyltransferase Gid |
Protein accession | YP_001240344 |
Protein GI | 148255759 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0558051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGCG CCGGGCTGGC CGGATCCGAG GCTGCGTGGC AGCTCGCGGA AGCGGGTGTG GACGTCGTTC TGCACGAGAT GCGGCCGGAC CGCATGACCG AGGCGCATCG GACTGCGACG CCGGCAGAGC TTGTCTGCTC CAACTCGTTC CGTTCGGACG ATGCCGCCAA CAACGCCGTC GGCCTGCTTC ATGCCGAGAT GCGCCGCTTG GGCTCCCTCA TCATGCGCGC GGCCGACGCA AACCAGGTTC CGGCCGGCGG AGCGCTGGCG GTCGACCGTG AGGGCTTTTC GGCAGCCGTG GCCACCGCTC TGAACGGGCA TCCGCGGATC GAACTGCGGC GCGGCGAGAT CACCGGCCTG CCGCCTTCCG ACTGGGACAA TGTCATCATC GCCACCGGCC CCCTCACCTC TCAGCCGCTG GCCGAAGCGA TTCGCGACCT GACCGACGAG ACCGCGCTCG CCTTCTTCGA TGCCATCGCG CCGATCGTGC ACAGGGACAC GATCGACATG TCCAAGGCCT GGTTCCAGTC GCGCTACGAC AAGGTCGGCC CCGGTGGCAC CGGCGCCGAC TACATCAACT GCCCGATGAC CAAGGACCAG TACGACACAT TCGTTGCGGC CCTGCTCGCC GGCGAGAAGA CCGACTTCAA GGACTGGGAG ACCAACACGC CCTATTTCGA CGGCTGCCTG CCGATCGAGG TGATGGCCGA GCGCGGCCAT GAGACGCTGC GCCATGGTCC GATGAAGCCG GTCGGCCTGA CCAATCCGCA CAACCCGACA GTCAAGCCGC ATGCCATCGT GCAGTTGCGC CAGGACAACA AGCTCGGCAC GCTCTACAAC ATGGTCGGCT TCCAGACGAA GCTGAAATAC GGCCCGCAAC AGCAGATCTT CCGCACCATC CCCGGGCTCG AGAACGCCGA ATTCGCGCGG CTCGGTGGCC TGCATCGCAA CACGTTCCTC AACTCGCCGA AATTGCTCGA TGCGCAGCTG CGTCTGCGCG CTCAGCCGCG GCTTCGTTTT GCCGGCCAGA TGACGGGCTG CGAGGGCTAT GTCGAGTCGG CCAGCATCGG TCTCATCGCC GGATTGTACG CGGCTGCGGA AGCGCGCGGC ACAGGCCTGT CGCCGCCCCC CGCCACCACC GCGCTCGGCG CCCTGCTCGG CCACATCACC GGCGGGCATA TCGAGACGAT CGACGGCGCG ACGCGCTCCT TTCAGCCGAT GAACATCAAT TTCGGCCTGT TCCCACCATT GGCGGTGGCG CCGACCCGAA AGCCCGATGG CAGCCGATTG AAGGGCAATG AGAAGACCGT CGCGAAGAAG CAGGCGCTGA GCGCCCGCGC ACTGGCAGAT CTCGATGGCT GGATCGCCGA ACATCTGCGC GTCGCCGCGG CTGCATGA
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Protein sequence | MIGAGLAGSE AAWQLAEAGV DVVLHEMRPD RMTEAHRTAT PAELVCSNSF RSDDAANNAV GLLHAEMRRL GSLIMRAADA NQVPAGGALA VDREGFSAAV ATALNGHPRI ELRRGEITGL PPSDWDNVII ATGPLTSQPL AEAIRDLTDE TALAFFDAIA PIVHRDTIDM SKAWFQSRYD KVGPGGTGAD YINCPMTKDQ YDTFVAALLA GEKTDFKDWE TNTPYFDGCL PIEVMAERGH ETLRHGPMKP VGLTNPHNPT VKPHAIVQLR QDNKLGTLYN MVGFQTKLKY GPQQQIFRTI PGLENAEFAR LGGLHRNTFL NSPKLLDAQL RLRAQPRLRF AGQMTGCEGY VESASIGLIA GLYAAAEARG TGLSPPPATT ALGALLGHIT GGHIETIDGA TRSFQPMNIN FGLFPPLAVA PTRKPDGSRL KGNEKTVAKK QALSARALAD LDGWIAEHLR VAAAA
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