| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4242 |
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| Symbol | |
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| ID | 5149107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4458202 |
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| End bp | 4458954 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640559065 |
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| Product | putative short-chain dehydrogenases/reductases (SDR) family protein |
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| Protein accession | YP_001240202 |
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| Protein GI | 148255617 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.214717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGGA GACTCGAAGG CAAGGTGGCG CTGGTGACCG GCGCATCCAA GGGGATCGGC
GCCGAGATCG CGGCGCGGCT GGCGGCGGAA GGAGCCGCGG TCGCCGTCAA TTACAGCGCC
AGCAAAGCGG GCGCTGAACG CGTGGTGGCC GCGATCGCCG CCAAGGGCGG CAAGGCGGTC
GCCGTCGGCG GCAATTTGAC CGATGCCGGC CAGGTGAAGG GCGTGGTCGC CGAGACCGTC
AAGGCATTCG GCCCGATCGA CATCCTCGTC AACAATGCCG GCGTCTACGC CTTCGCGCCG
CTGGACGGCA TCACGCCGGA GCATTTCCAC AGCCAGTTCG ATCTCAACGT GCTCGGCCTG
TTGCTGGTGT CGCAGGAAGC CGCGCGGCAT TTCAATCCGG CGGGCGGCAG CATCGTCAAC
ATCTCCTCCG GCGTCTCGAC GCTGACGCCG CCGAACACCG CCGTCTACAG CGCGACCAAG
GCGGCGGTCG ACGCGATCTC CGCGGTGCTG TCCAAGGAGC TCGCGCCGCG CAAGATCCGC
GTCAACACCG TCAATCCCGG CATGATCGTG ACCGAAGGCG TCGTCGCGGC AGGCTTGCAC
GAGGGCGACA TGCGCAAATG GATCGAATCC ACCACGCCGC TCGGCCGCGT CGGCAAGGCC
GCGGAGATCG CCGCCGCCGT CGCGTTCTTC GCCTCGGATG ATGCGTCCTA TGTCACCGGT
GAGACGCTGC ACGTGACGGG CGGGTTGCGC TGA
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| Protein sequence | MTRRLEGKVA LVTGASKGIG AEIAARLAAE GAAVAVNYSA SKAGAERVVA AIAAKGGKAV
AVGGNLTDAG QVKGVVAETV KAFGPIDILV NNAGVYAFAP LDGITPEHFH SQFDLNVLGL
LLVSQEAARH FNPAGGSIVN ISSGVSTLTP PNTAVYSATK AAVDAISAVL SKELAPRKIR
VNTVNPGMIV TEGVVAAGLH EGDMRKWIES TTPLGRVGKA AEIAAAVAFF ASDDASYVTG
ETLHVTGGLR
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