Gene BBta_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4217 
Symbol 
ID5150253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4430481 
End bp4432001 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content65% 
IMG OID640559042 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001240179 
Protein GI148255594 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCTG AGGTGAGACG AAGGCGCACG CTGGGACAGA TCCTGCTGTT GTCGGCGGGC 
TTTGTGGTGC TGGTTGCCGT CAGCACGGCG TCGGTTCTGC TGGTCAACAA GGCCCGCAGG
GATAGCGCCT GGGTGGTGCA CACCGTCGAG GCCGAGAACC AGATCAACGC CTTGTTGCTC
GAGGTCCGGC GCGCCGAGAG TGGCGTGCGC GCCTATCTGC TGACGCAGAA CCCGGAATTT
CTCAAAGACC ACGAAGCCGC CGTGAAGGCG CTCCGGCCGC TGCTCGACAA GCTGGGCACG
CTCGTCGCCG ACAACCAGAA GCAGGTTGAA AATCTCGCCC GACTGCGCAG CGTGATCGAA
GGCCGGCTGG CCCAATTCGA TCGCGAGAAG GCGCTGGTTG CATCCGGCGA CCTCCCCGGC
GCCGTCGCGC TGGTGCGCGA TGCCGGATCG ACTGACAGCA GCAACATGAT GCGCAACACC
GCCGAGACGA TGCGCCTCGA GGAGGAACGC CTGCTGGCTT TGCGGACCGC CAATGCCGAT
GCCAGCCAGC AATTGGCGGC CATCGTCACC ATCACGGGGT CAGCCCTCGT TGTGGTGCTT
GCGGTCATCT CGGTGCTGCT GGTGCGCCGC TCCACCCGCG CCCGCGATGA TGCCGAGGCG
CAGCTGCGCG AGAGCAACCT GAACCTGGAG GCGACCGTCG ACGAGCGCAC CGCGGATCTG
CGCGAAGCCA ACGAGGAGAT CCAGCGCTTC GCCTACATCG TCAGCCACGA TCTGCGCTCG
CCGCTGGTCA ACATCATGGG CTTCACCAGC GAGCTCGACG AGCTGCGCAA CGATATCTTC
CGCCGCATCG CGGCGCTGGC GCGCGCGGTA TCCGACTCGC CGCCTCCCGC CGAGGGCGCC
GAACCGGAGC TGGAAGGCGC CGACAAGCAG CTCTCCGAGG ATTTCTCGGA GGCGTTGGGC
TTCATCAAAT CCTCGATTGC GAAGATGGAC CGGCTGATCT CAGCCATCCT CAATTTGACC
CGCGAAGGAC GACGTGAGTT CGTTCCGGTG CGGATCGAAA CGCGCGAGCT GATCGAGGCG
ATCGTCTCCA CGCTCGCCCA TCAGGCAGAA GAAGCGCAGG CGACCATCCG CATCGAGCCG
CTGCCCGCAA TCATCAGCGA CCGCTTGGCG CTGGAGCAGA TCTTCTCCAA CCTGATCGAC
AACGCGATCA AATATCTGAA GCCCGGAGTG CCAGGGGATA TCGCCATCCG CGCCCGCACC
AAGCTGGGCT TCGCGATCTT CGAAATCACC GACAATGGCC GGGGGATTGA TCCCCGGGAT
CACCAACGTA TCTTTGACCT GTTCCGCCGC GCCGGGACGC AGGATCGTCC GGGCCAGGGA
ATCGGGCTCG CCCATGTGCG CGCGCTGGTG CGGCGGCTCG GTGGAACCAT GTCGGTTGCC
TCGGAACTCG ACCAGGGCAG CACCTTCACC ATCACGCTTC CGATCAAATG GAATGCCTCA
AACCGGAACT CAGACCGATG A
 
Protein sequence
MAPEVRRRRT LGQILLLSAG FVVLVAVSTA SVLLVNKARR DSAWVVHTVE AENQINALLL 
EVRRAESGVR AYLLTQNPEF LKDHEAAVKA LRPLLDKLGT LVADNQKQVE NLARLRSVIE
GRLAQFDREK ALVASGDLPG AVALVRDAGS TDSSNMMRNT AETMRLEEER LLALRTANAD
ASQQLAAIVT ITGSALVVVL AVISVLLVRR STRARDDAEA QLRESNLNLE ATVDERTADL
REANEEIQRF AYIVSHDLRS PLVNIMGFTS ELDELRNDIF RRIAALARAV SDSPPPAEGA
EPELEGADKQ LSEDFSEALG FIKSSIAKMD RLISAILNLT REGRREFVPV RIETRELIEA
IVSTLAHQAE EAQATIRIEP LPAIISDRLA LEQIFSNLID NAIKYLKPGV PGDIAIRART
KLGFAIFEIT DNGRGIDPRD HQRIFDLFRR AGTQDRPGQG IGLAHVRALV RRLGGTMSVA
SELDQGSTFT ITLPIKWNAS NRNSDR