Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4137 |
Symbol | nirA |
ID | 5152343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4342898 |
End bp | 4344712 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558967 |
Product | ferredoxin-nitrite reductase |
Protein accession | YP_001240105 |
Protein GI | 148255520 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.298676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.314956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCTG GAGCTTCGTC CGCCATCATG AAAATCGAAC CCTTGTCAGT CGGCTTCAAC GACGAGCAGA AGCGCTATCT CGAAGGCCTG GCCGCCGGCC TCAAAGTCAA CCTGGCGGGC CGGGCTCAGA CTGCCACCGC CCCCCTTGCG GAGCCGAGCG GGCCTGATGC CATCCATATC AAGGCGCAGG ACAAGGTCCT CGCAGCGGGT CGCAAGCTCG CCGACCAGGA GAAGGTCAAG CGCGAGCAGC ATCCGTTCGA TGCCTATCCG CGCTTGAAGC AGCAGGCCCA CAGCAACGCA GCGCCGTCTG CGGCCGACAA TTTCCGCTGG CGCTATTTCG GCCTGTTTCA TGTCGCGCCG GCGCAGGATT CCTACATGTG CCGGCTACGG ATTCCGAACG GCATCCTGAA GCATTGGCAG CTCACGGGGC TAGCCGACCT CGCCGATCAG CTCTGCGGTT CGTACAGCCA CGTGACCACG CGGGCCAATC TGCAACTGCG CGAAATCCCG CCCAAGCACG CCGTCATGCT GCTGGAGGGC CTGTCCGATC TCGGGCTGAC TGCGCGCGGT TCCGGCGCCG ACAACATCCG CAATGTGACG GGCACGCCGA CCGCCGGCAT CGATCCGCAG GAATTGCTCG ATACCCGCGC CTATGCGCGC GAATGGCATT TTCACATCCT CAACGACCGC TCGCTGTACG GACTGCCGCG CAAATTCAAC GTCGCGTTCG ACGGCGCCGG CCGGATCGCG GCGCTCGAAG ACACCAATGA CATCGCGTTC TCCGCCGTCG AGGTGAAGGA TGGCTTCGGC GTCGCGCCGG GCGTCTGGTT CAGGCTCGGC CTCGGCGGCA TCACCGGTCA CAAGGATTTC GCCAAGTCCA CCGGGATCAT CGTCGAGCCC GAGCGCGCCA CCGAAGTGGC CGATGCCATC GTGCGGCTCT TCATCGAGAC CGGCGATCGC ACCAATCGCC TGAAGGCGCG GCTCAAATAT GTGCTCGACA GCATGGGCCA TGACAAATTC ATGGAAGCTG TCGAGTCGCG GCTCGGCCGC AAGCTTGCGC GCGTCGCGGA CGAGGCGATC AAGCCGCGGC CCGAAGCCGA TCGCATGGCC CATATCGGCG TGCACCCGCA GAAGCAGCAA GGCCTGAACT GGATCGGCGT CGTGCTGCCG CTGGGCAAGC TGACGACGGA CCAGATGCGC GCGCTCGCCA GGATCGCTGC GGATCTCGGT GACGGCGAGA TCCGGCTCAC GGTCTGGCAG AACCTGCTGC TACCGGGCGT GCGCGACGAG AACGTCGCCA TGGCCTGTGC CGCGATCGAG CAGATCGGTC TCTCGACCAA GGCGTCGCAC ATCCGCGCCG GACTGATCGC CTGCACCGGC AATTCCGGTT GCAAGTTCGC CGCCAGCAAC ACCAAGCGTC ACGCCGCCGA GATTGGTGAC TGGTGCGAGA GCAGGGTGGA GGTCGATACC CCGCTGAACA TCCATCTCAC CGGCTGCCAT CACTCCTGCG CCCAGCACTA CATCAGCGAC ATCGGCATGA TCGGAGCGAA GGTCCCAGTC GGCGATGGCG ACGAGACGGT CGAGGGCTAT CACCTGTTCG CCGGCGGCGG CTTCGGCCCG CAGGCCGACA TTGGCCGCGA AGTCTATCGC GACCTCAAGG CGGAGGACGC GCCGCGCACC GTCGAGAAGC TGCTCAAGGC CTATCTGGCG CACCGCCTCT CTCCCGATGA AACCTTCCTG TCCTTTGCCC GCCGGCACGA TGGCGAAACC CTGCGCAAGC TCGCCGACGC GCAGACGTCC GAGGTGGCCG CATGA
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Protein sequence | MAAGASSAIM KIEPLSVGFN DEQKRYLEGL AAGLKVNLAG RAQTATAPLA EPSGPDAIHI KAQDKVLAAG RKLADQEKVK REQHPFDAYP RLKQQAHSNA APSAADNFRW RYFGLFHVAP AQDSYMCRLR IPNGILKHWQ LTGLADLADQ LCGSYSHVTT RANLQLREIP PKHAVMLLEG LSDLGLTARG SGADNIRNVT GTPTAGIDPQ ELLDTRAYAR EWHFHILNDR SLYGLPRKFN VAFDGAGRIA ALEDTNDIAF SAVEVKDGFG VAPGVWFRLG LGGITGHKDF AKSTGIIVEP ERATEVADAI VRLFIETGDR TNRLKARLKY VLDSMGHDKF MEAVESRLGR KLARVADEAI KPRPEADRMA HIGVHPQKQQ GLNWIGVVLP LGKLTTDQMR ALARIAADLG DGEIRLTVWQ NLLLPGVRDE NVAMACAAIE QIGLSTKASH IRAGLIACTG NSGCKFAASN TKRHAAEIGD WCESRVEVDT PLNIHLTGCH HSCAQHYISD IGMIGAKVPV GDGDETVEGY HLFAGGGFGP QADIGREVYR DLKAEDAPRT VEKLLKAYLA HRLSPDETFL SFARRHDGET LRKLADAQTS EVAA
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