Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4119 |
Symbol | |
ID | 5154620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4327623 |
End bp | 4328534 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640558950 |
Product | ABC transporter permease protein |
Protein accession | YP_001240088 |
Protein GI | 148255503 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0396939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.542053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGA TGACCGTCGA CAAGGCCGGC CCGACCCGCA CCGTCAAATA CGGCTCGATG AGCCGCGACC GCGCCTGGGC GCTGCGCTGG TCGTATTTCT TCCTGACGCT GTTTGCGATC TTCTCGCTGG TGCCGCCGCT TTATATGCTG ATCACATCAT TGAAGGGCAG CGCGGAGATC TCCGCCGCGA CCAATCCGTG GTGGGTGTTC CATCCGACCC TGGAGAACTA TGCCGGGCTT TTGACCTCGA ACCAGTTCCT GCGCTTCTTC TTCAACTCGG CGATGGTCTC GATCATCGTC GTGATCATCA CCATGTTGAT CAGCATCCCC GCCGCGTTCG CGCTGTCACG GATGAAGTTC TGGGGCTCGG CCACGCTCGC CACCGGCGTG TTCCTGACCT ATCTGATCCC GGACAGCCTG CTGTTCATTC CGCTGTTCAA GATGTTCGCG CTGATCGGCG ACGTCACCGG CATCCAGCTG ATCAACCGCT GGTACGTGTT GCTGTTCATC TATCCGACGC TGACGGTGCC GTTCTGCACC TGGATCATGA TCGGCTATTT CGCCTCGATC CCGAAGGAGC TCGACGAGGC CGCGATCATC GACGGCGCCT CCTGGCTGCA GACCTTGACG CGCATCTTCA TCCCGGTCGC CCTGCCCGGC CTGATCGCCG CGACGATCTT CGCCTTCACC GTATCCTGGG CGCAGTTCCT CTATCCGCTG GTGTTCACGA CCTCGGCCGA CCAGCTGGTG CTGCCGGTCG GCATCGTCAC CACGCTGATC AAGGGTGATG TCTTCAACTG GGGGCAGATC ATGACCGGCG CGCTGCTCGG CGCCGCGCCG CCCTTGATCA TCTACGCATT CCTGATGGAC TACTACATCG CCGGACTGAC GGCCGGCGCG ACCAAGGGTT GA
|
Protein sequence | MSTMTVDKAG PTRTVKYGSM SRDRAWALRW SYFFLTLFAI FSLVPPLYML ITSLKGSAEI SAATNPWWVF HPTLENYAGL LTSNQFLRFF FNSAMVSIIV VIITMLISIP AAFALSRMKF WGSATLATGV FLTYLIPDSL LFIPLFKMFA LIGDVTGIQL INRWYVLLFI YPTLTVPFCT WIMIGYFASI PKELDEAAII DGASWLQTLT RIFIPVALPG LIAATIFAFT VSWAQFLYPL VFTTSADQLV LPVGIVTTLI KGDVFNWGQI MTGALLGAAP PLIIYAFLMD YYIAGLTAGA TKG
|
| |