Gene BBta_4119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4119 
Symbol 
ID5154620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4327623 
End bp4328534 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content62% 
IMG OID640558950 
ProductABC transporter permease protein 
Protein accessionYP_001240088 
Protein GI148255503 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0396939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.542053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TGACCGTCGA CAAGGCCGGC CCGACCCGCA CCGTCAAATA CGGCTCGATG 
AGCCGCGACC GCGCCTGGGC GCTGCGCTGG TCGTATTTCT TCCTGACGCT GTTTGCGATC
TTCTCGCTGG TGCCGCCGCT TTATATGCTG ATCACATCAT TGAAGGGCAG CGCGGAGATC
TCCGCCGCGA CCAATCCGTG GTGGGTGTTC CATCCGACCC TGGAGAACTA TGCCGGGCTT
TTGACCTCGA ACCAGTTCCT GCGCTTCTTC TTCAACTCGG CGATGGTCTC GATCATCGTC
GTGATCATCA CCATGTTGAT CAGCATCCCC GCCGCGTTCG CGCTGTCACG GATGAAGTTC
TGGGGCTCGG CCACGCTCGC CACCGGCGTG TTCCTGACCT ATCTGATCCC GGACAGCCTG
CTGTTCATTC CGCTGTTCAA GATGTTCGCG CTGATCGGCG ACGTCACCGG CATCCAGCTG
ATCAACCGCT GGTACGTGTT GCTGTTCATC TATCCGACGC TGACGGTGCC GTTCTGCACC
TGGATCATGA TCGGCTATTT CGCCTCGATC CCGAAGGAGC TCGACGAGGC CGCGATCATC
GACGGCGCCT CCTGGCTGCA GACCTTGACG CGCATCTTCA TCCCGGTCGC CCTGCCCGGC
CTGATCGCCG CGACGATCTT CGCCTTCACC GTATCCTGGG CGCAGTTCCT CTATCCGCTG
GTGTTCACGA CCTCGGCCGA CCAGCTGGTG CTGCCGGTCG GCATCGTCAC CACGCTGATC
AAGGGTGATG TCTTCAACTG GGGGCAGATC ATGACCGGCG CGCTGCTCGG CGCCGCGCCG
CCCTTGATCA TCTACGCATT CCTGATGGAC TACTACATCG CCGGACTGAC GGCCGGCGCG
ACCAAGGGTT GA
 
Protein sequence
MSTMTVDKAG PTRTVKYGSM SRDRAWALRW SYFFLTLFAI FSLVPPLYML ITSLKGSAEI 
SAATNPWWVF HPTLENYAGL LTSNQFLRFF FNSAMVSIIV VIITMLISIP AAFALSRMKF
WGSATLATGV FLTYLIPDSL LFIPLFKMFA LIGDVTGIQL INRWYVLLFI YPTLTVPFCT
WIMIGYFASI PKELDEAAII DGASWLQTLT RIFIPVALPG LIAATIFAFT VSWAQFLYPL
VFTTSADQLV LPVGIVTTLI KGDVFNWGQI MTGALLGAAP PLIIYAFLMD YYIAGLTAGA
TKG