| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4094 |
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| Symbol | |
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| ID | 5154595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4292611 |
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| End bp | 4293606 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558927 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| Protein accession | YP_001240066 |
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| Protein GI | 148255481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0716973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGATGT CAGCGGCTTC GGCCGTCCTG GGTGGGATTG CGGCCCCGCA TGTCGCGCGC
GCTGAGAGCG CCGAGTTTAC CTATAAATAC GCCAACAACC TGCCCGACAC GCATCCGCTC
AACGTCCGCG CCAAGGAAAT GGCGGCAGCG ATCAAGGCCG AGACCAACGG CAAGTTCGAC
CTGCAGATCT TCCCGAACAA CCAGCTCGGC TCGGACACGG ACATGCTGAG CCAGATTCGC
TCCGGCGGCG TCGAGTTCTT CACGCTGTCC GGGCTGATCC TGGCCACGCT GGTGCCGGCC
GCTTCGATCA ACGGCATCGG TTTCGCCTTC CCGGATTACG ACACGGTCTG GAAGGCCATG
GACGGCGATC TCGGCGCCTA TGTGCGCGGC CAGATCAACA AGGCCGGCCT GATGGTCATG
GACAAGATCT GGGACAACGG CTTCCGCCAG ACGACGTCGT CGACCAAGCC GATCAATGGT
CCCGACGATC TCAAGGGCTT CAAGATCCGC GTGCCGGTCT CGCCGCTGTG GACCTCGATG
TTCAAGGCGT TCGAGGCCGC GCCCGCCTCG ATCAATTTCA GCGAGGTCTA TTCGGCGCTG
CAGACCAAGG TCGTCGAGGG CCAGGAGAAC CCGCTGGCGA TCATCTCGAC CGCCAAGCTC
TACGAGGTGC AGAAATACTG CTCGCTGACC AACCACATGT GGGACGGCTT CTGGTTCCTG
GCCAACCGTC GCGCCTGGGA AGCCGTGCCG GCCGACATGC GCGCGATCGT CGCCAAGCAC
ATCAACGCCG CCGCCGTGAA GGAGCGCGAG GACGTCGCCA AGCTCAATGC CGGCCTGCAA
GCGGAACTCG CGTCCAAGGG ACTGACCTTC AACCAGCCCA ACGTGGCGCC ATTCCGCGAC
AAGCTGCGCA GCGCCGGCTT CTATGCCGAG TGGAAGGGCA AGTATGGCGA CGAGGCCTGG
GCGCTGCTCG AAAAGGCCGT CGGCAAGCTG TCGTAA
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| Protein sequence | MRMSAASAVL GGIAAPHVAR AESAEFTYKY ANNLPDTHPL NVRAKEMAAA IKAETNGKFD
LQIFPNNQLG SDTDMLSQIR SGGVEFFTLS GLILATLVPA ASINGIGFAF PDYDTVWKAM
DGDLGAYVRG QINKAGLMVM DKIWDNGFRQ TTSSTKPING PDDLKGFKIR VPVSPLWTSM
FKAFEAAPAS INFSEVYSAL QTKVVEGQEN PLAIISTAKL YEVQKYCSLT NHMWDGFWFL
ANRRAWEAVP ADMRAIVAKH INAAAVKERE DVAKLNAGLQ AELASKGLTF NQPNVAPFRD
KLRSAGFYAE WKGKYGDEAW ALLEKAVGKL S
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