Gene BBta_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4053 
Symbol 
ID5149013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4253045 
End bp4253341 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content59% 
IMG OID640558886 
Producthypothetical protein 
Protein accessionYP_001240025 
Protein GI148255440 
COG category 
COG ID 
TIGRFAM ID[TIGR02953] pentapeptide MXKDX repeat protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.161361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGC GGCGCATCGG TCGCCGTCCA ACCCCGTCTC TCGAAGGAGC GATCATCATG 
ACCTATCGTA ATCGTCTCGT CCTCGGCCTC TCTGCCGCTG CTCTCGCCTT CAACGTCGCC
ATCGCGCCCG CGGCGTTCGC CGAGGACAAG ATGGGCAAGG ATGATGCGAT GAAGAAGGGG
GCGATGTCCC ACGACTCGAT GAAGAAGGAC GCGATGGGCA AAGACGAGAT GAAGAAGGGC
GATGCCATGT CGAAGGACGG GATGAAGAAG GACGACGGCA TGATGAAGAA GAACTAG
 
Protein sequence
MEERRIGRRP TPSLEGAIIM TYRNRLVLGL SAAALAFNVA IAPAAFAEDK MGKDDAMKKG 
AMSHDSMKKD AMGKDEMKKG DAMSKDGMKK DDGMMKKN