Gene BBta_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4020 
Symbol 
ID5152470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4224341 
End bp4225348 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID640558851 
Producthypothetical protein 
Protein accessionYP_001239992 
Protein GI148255407 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA TTGAAGCCAT TCCGACCGTC ATTGGCACGG CTGCCATTGC CCCGGCGCTC 
CTGATCCTGT GGCTTGTGGT TGCCGCCGGC GACAATGCTG GACCGCCGCT CAAGATCTGG
ACCGCTTTCC TGCTGGGCGC GGCCAGCGTG CTGCTGCTCG GCATCGTCAG GGCGCCGTTT
CGCGACGTTG GACTGCAGTT GGACAACCCG TGGATGGCGC AGCTGGTGCG GGCCATTTTC
GGCGTGTCGA TCCCCGAGGA GATTGCCAAG ATCGCCGTGA TCGCGGCGAT GTCGTCGCGG
CGCCGGCAGT TCGGCAATGC CATGGATACG GTGTTCTATG GCGCGGCGGT CGGCCTCGGC
TTCGCCGCTT ACGAAAACCT CGCTTATCTC GTCCAGCACG CCGAGATGTG GCGGTCCTTG
GCCGTGCTGC GCAGCATCCT CACGGTGCCG TTCCATGGCG CACTCGGCAT TATCGCCGGT
GCGTATCTGG CGATCGCCCG CACCGGGACG GCGCTGGGCG CCCATCGCCA CAACCGCGAC
TGGGCGCGGT GGTCGAGCTG GGTCCTGGTG CTGGCAGCGC CGGTGGCGCT GCATGCCGCG
TTCGACTACC CGCTGCTGAT GCTGCAACGA GGCTCGGGTC TCGACCCGAC GGCGCGGCTG
TGGCTCGGCG GCGTCAGCGT GCTGATCGGC TTTTCGTCGA TCGCACTTGC CGTGCGGCTG
GTGCGGCGGG TGGCCCGTCA TCACACGCCG CGCACCGACG TCGCGCGCGC GCGGCTGAGC
CAGCTGCGAC GGATGTGGGC GCTGCTTCTG CTCGGCGGCG CCGCCGGCTT CATCGGGCTC
GGCTTCGTCC TGACCTCGGT GCGGCACTGG CTGCTCAACC CCGACCGCAA TGTCGCGGGT
GTGCTCGTCC CGCTCGGACT CACCGCCATT CTGCTCGGAG CCGCGCTATT GATTGTCACA
ACGACGATCT ACATTTTCGG CCGCAATCGG ATCCGCACGA CCGCCTGA
 
Protein sequence
MNLIEAIPTV IGTAAIAPAL LILWLVVAAG DNAGPPLKIW TAFLLGAASV LLLGIVRAPF 
RDVGLQLDNP WMAQLVRAIF GVSIPEEIAK IAVIAAMSSR RRQFGNAMDT VFYGAAVGLG
FAAYENLAYL VQHAEMWRSL AVLRSILTVP FHGALGIIAG AYLAIARTGT ALGAHRHNRD
WARWSSWVLV LAAPVALHAA FDYPLLMLQR GSGLDPTARL WLGGVSVLIG FSSIALAVRL
VRRVARHHTP RTDVARARLS QLRRMWALLL LGGAAGFIGL GFVLTSVRHW LLNPDRNVAG
VLVPLGLTAI LLGAALLIVT TTIYIFGRNR IRTTA