| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4000 |
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| Symbol | |
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| ID | 5152063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4207882 |
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| End bp | 4209723 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640558833 |
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| Product | exonuclease RecJ |
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| Protein accession | YP_001239974 |
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| Protein GI | 148255389 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC TTGCCACAGC CCTGCCGATG AGTGCGCCCC AGGCGTTCCT CGGCGTGCGG
CTGTCGCTCA CCAACAAATT GTGGCGCGAC CGGCTGGATG CCCGCGGCGC AGCGCGGGCG
CTGGCGATGG TGCAGCGCTA TCAGCTGCCG GAGATGCTGG CCCGGGTCCT GGCCGGACGC
GACGTCGACA TCGACGCCGT CAACGACTTC CTCGACCCCA CCATCCGCAA GCTGATGCCA
GATCCGTTCA CGGTGACGCA GATGGAAGCC GCGGCCAAGC GCATTGCGGA TGCCGCGGTC
AGGGGAGAGA AGGTCGCGAT CTTCGGCGAC TATGACGTCG ACGGCGCCAC CTCGGCGGCG
CTGCTCGCCT GGCATCTGCG CCATTGCGGG CTGGATCCGC TGATCCACAT TCCCGACCGC
ATCTTCGAGG GCTATGGCCC CAACGTCGAA GCCATCCGCG CGCTCGCCGG CAAAGGCGCG
ACCCTGCTCG TCACGGTCGA TTGCGGCACG ACCAGTCTGG AGCCGTTGGC CGAGGCGAGG
CGGCTCGGCA TGTCCGTGGT TGTGATCGAC CACCATCAAT GCGGCGAGGA GCTGCCCGAG
GTCGAGGCAC TGGTCAACCC GAACCGGCCC GACGATCTCT CCGGCCTCGG CTATCTCGCT
GCGGTGGGGC TGACCTTGGT GACCCTGGTC GCAGTCAACA GGGAGCTGCG CGGCCGCGGC
TTCTGGAGCG GGACGCGGCC GGAGCCTGAT CTCCTGAGCA TGCTGCATCA CGTCGCGCTC
GGCACCGTCG CCGACGTCGC GCCGTTGATC GCGCTCAACC GCGCCTTTGT CGCCAAGGGC
CTGATCGCGA TGCGCCGGCG CGACCATGTC GGCCATACCG CGCTGATGGA TGTCGCGCGT
CTCAACGGCC CGCCGGAGGC GTGGCATCTC GGCTTCATGC TCGGGCCGCG CATCAATGCC
GGCGGCCGCA TCGGCCGCGC CGATCTCGGC GTGCGGCTGC TGCTGGAGAG CGACGTTTCC
GAGGCCGCTC GGATCGCCGC CGAGCTCGAC CGGCTCAACA GCGAGCGCCG CATCATCGAG
CAGCACGCCG AGGCACAGGC CGAGGCGGAA GCGCTGGCGT CGCTGGGCCT GGAAGACAAG
GGTGCTGTCA TCGTGACAGC CTCCGAAGGC TGGCATCCCG GCGTGGTCGG GCTGGTCGCG
TCCAGGCTGA AGGAAAAGTT CGCGCGGCCC GCCTTTGCGA TCGCGCTCGA GCCCGGCGGC
ATCGGCACCG GATCGGGCCG CTCGATACCG GGCGTCGATC TCGGTAAGGC CGTGCGCCAC
GCCGTGGAGC AGGGCCTCCT GATCAAGGGC GGCGGCCATG CCATGGCCGC CGGCGTCACC
CTGCGCAAGG AACGGCTGGC GGAATTCCGC GCTTATCTCG AAAGCGCGCT CGCGGCTGAC
GTGGCCGAGG CGCGCCACGT CAACGAGATC CTGATCGATG GCGCGATCAG CGCGCGCGCC
GCGACGCCGG AGCTGGTCGC GACGCTCAAT CGCGCGGGTC CGTTCGGCAG CGGCAATCCC
GAGCCGATCG TGGCACTGCC GTCGCATCAG CTGGTCTATG CCGACGAGGT CGGGCAGGCG
CATCTGAAGC TGCGCTTCAA GTCCGGTGAC GGCGCCACCG TCAACGCCAT TGCGTTCCGC
TCGGTCGGCC AGAAGCTCGG CAATGCGCTG GTTCAGCATC GCGGCCAGGT CCTGCACGTC
GCCGGCACGC TCACTGTCGA CCGCTACCAG GGCGTCGAGC GCGTGCAGCT GCGCGTCCTC
GATGTCGCCG TGCCGGACCA CGGTCCGGCG ATGATCCGGT AG
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| Protein sequence | MTPLATALPM SAPQAFLGVR LSLTNKLWRD RLDARGAARA LAMVQRYQLP EMLARVLAGR
DVDIDAVNDF LDPTIRKLMP DPFTVTQMEA AAKRIADAAV RGEKVAIFGD YDVDGATSAA
LLAWHLRHCG LDPLIHIPDR IFEGYGPNVE AIRALAGKGA TLLVTVDCGT TSLEPLAEAR
RLGMSVVVID HHQCGEELPE VEALVNPNRP DDLSGLGYLA AVGLTLVTLV AVNRELRGRG
FWSGTRPEPD LLSMLHHVAL GTVADVAPLI ALNRAFVAKG LIAMRRRDHV GHTALMDVAR
LNGPPEAWHL GFMLGPRINA GGRIGRADLG VRLLLESDVS EAARIAAELD RLNSERRIIE
QHAEAQAEAE ALASLGLEDK GAVIVTASEG WHPGVVGLVA SRLKEKFARP AFAIALEPGG
IGTGSGRSIP GVDLGKAVRH AVEQGLLIKG GGHAMAAGVT LRKERLAEFR AYLESALAAD
VAEARHVNEI LIDGAISARA ATPELVATLN RAGPFGSGNP EPIVALPSHQ LVYADEVGQA
HLKLRFKSGD GATVNAIAFR SVGQKLGNAL VQHRGQVLHV AGTLTVDRYQ GVERVQLRVL
DVAVPDHGPA MIR
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