Gene BBta_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3940 
Symbol 
ID5151318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4135493 
End bp4135960 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID640558774 
Productputative two-component response regulatory protein, response regulator receiver 
Protein accessionYP_001239916 
Protein GI148255331 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.238381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.445341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACTG TTCTCATTAT CGATGATGAT TCTGCGACGC GCGCGGCGCT TGAAACCCTG 
CTCAAAAAGA AGAAGTTCTG CGTCTTTCTC GCGCCCGACG GACCGACCGG TATTCGTTTG
ATCGGCAGCG TGTCATTCGA CGCTGTCGTG ATCGATATGT TCATGCCGGG CATGGACGGA
ATTGCGACCA TTCGCGAATT GATCAAGATC GATCCGACCG TTCCGTTCAT CGCAATCTCC
GGCTACGCAT TCACGGACAA GAAACAGGGA GCTCCCGACT TCCTCGGAAT GGCGATCAAG
CTCGGGGCGA CGGCTGCGCT GCAGAAGCCG TTCGACCTCC TTGATCTGCT CGAAGCTGTG
GATCGCGCCA TCGAGGTCCG CCAGCGGCTT CTCGCCGACG CGCGCGGCAA CCTCGCACCA
CACCGGCATC TGAGCGGAGA GCCTCATGAC GAACATCCTG GTCGTTGA
 
Protein sequence
MPTVLIIDDD SATRAALETL LKKKKFCVFL APDGPTGIRL IGSVSFDAVV IDMFMPGMDG 
IATIRELIKI DPTVPFIAIS GYAFTDKKQG APDFLGMAIK LGATAALQKP FDLLDLLEAV
DRAIEVRQRL LADARGNLAP HRHLSGEPHD EHPGR