Gene BBta_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3930 
Symbol 
ID5150836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4119305 
End bp4120618 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content63% 
IMG OID640558763 
Producthypothetical protein 
Protein accessionYP_001239906 
Protein GI148255321 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.562242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTG CGGTGGTTGG AACAGGTATT GCGGGGAATG CCGCAGCCTG GTCCTTGGCG 
AAGCGTTATC CGATCACCGT CTACGAGCGA GATCTCCGTC CGGGCGGCCA TAGTCACACC
ATAACGATCG ACTATGATGG CAGCCTTGTC GCTGTCGACA TCGGCTTCAT TGTCTACAAT
GAGCTGAATT ATCCGGAATT GACCGCCATG TTCGATCATC TCGGGGTCGA GACGGTCGCC
AGCAGCATGA GCTTCGCGGT GACGGCGGAT GCGGGCCGCT TCGAGTGGAA GGGCGGCGGT
GATAATTGGC TCGATACCGC CAAAGGACTG TTCGCCCAGC CGCGCAACCT GCTGTCCACG
TCCTATCTGT GGATGCTGCG GGACATCCTG ACCTTCAACG AGCAAAGCGT CGCCGACTTC
AAGGCCGGCC GCCTGCAGGG GCTGACGCTC GGCGACTATT TCCGGCGCAA TCATTTCGCG
CCACGGCTGC TGACCGATTA TCTGGCCCCC ATGGGGGCGG CGATCTGGTC TGCGCCGGCA
TCCGAGATGC TGGATTTTCC CGCCGAGAAT TTTGTAGCCT TCTTCAGCAA TCACCGATTG
CTGCAGTATG ATCGTCCGGT CTGGCGAACC GTCAAGGGCG GCAGCCGCCA ATATGTCGAG
AAGCTGACGG CCTCCTATCG CAACCAGATC CGGCTAGGCA GCGCCGTCAC CAGCATCGAG
CGCAGCGGAC AGGGCGTGGT CGTGGCGGAC AGCAGCGGCC ATCGCGACAC CTTCGATCAT
GTCGTGATCG CCGCCCATAG CGATCAGGCG CTTGCGATGC TGGCCGATGC CGACGAGCAG
GAGCGCAGCA TTCTCGGCGC AATCAAATAC TCGCCCAACA CGATCTATCT GCATCGCGAC
GCCAGGCTGA TGCCGAAGCG GCGCCGCGCC TGGGCTTCTT GGAATTTCCT GCGCTGGCAG
CGCGAGGGCG TGCCGATGAA CGACGTCGCG GTGACCTATT GGATGAACAA TCTGCAGGGC
ATCGACCACG ACAAGCCGCT GTTCGTGAGC CTCAACCCGC CCTTCGCTCC GGCGCCGGAG
CTTACGTTTG GCAAATACGT CTGCGAGCAC CCGCAATACA CGGCGGCCGC CTTTGCGGCG
CAGAAGCGTC TGGCGGCGAT CCAGGGGCAA CGCCACACCT GGTTCTGCGG GGCCTGGACG
GGTTATGGTT TCCACGAGGA TGGGCTGCGT TCGGGCCTCG CTGTGGCCGA GGCGCTCGGC
GCGACCGTGC CCTGGCGGGG ACTTCCGGCG GAGCTCGCCG AGGCCGCGGA ATAG
 
Protein sequence
MRVAVVGTGI AGNAAAWSLA KRYPITVYER DLRPGGHSHT ITIDYDGSLV AVDIGFIVYN 
ELNYPELTAM FDHLGVETVA SSMSFAVTAD AGRFEWKGGG DNWLDTAKGL FAQPRNLLST
SYLWMLRDIL TFNEQSVADF KAGRLQGLTL GDYFRRNHFA PRLLTDYLAP MGAAIWSAPA
SEMLDFPAEN FVAFFSNHRL LQYDRPVWRT VKGGSRQYVE KLTASYRNQI RLGSAVTSIE
RSGQGVVVAD SSGHRDTFDH VVIAAHSDQA LAMLADADEQ ERSILGAIKY SPNTIYLHRD
ARLMPKRRRA WASWNFLRWQ REGVPMNDVA VTYWMNNLQG IDHDKPLFVS LNPPFAPAPE
LTFGKYVCEH PQYTAAAFAA QKRLAAIQGQ RHTWFCGAWT GYGFHEDGLR SGLAVAEALG
ATVPWRGLPA ELAEAAE