Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3917 |
Symbol | |
ID | 5149776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4104146 |
End bp | 4105888 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640558750 |
Product | glycosyl transferase family protein 39 |
Protein accession | YP_001239893 |
Protein GI | 148255308 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA CCTTTGCCCG CCCCCGTTTT GGAGAGCCGC GCGAGCCGAA GAACCTGGTG AATCCGGGCA ATCGGCTGGT GCGGATGATC GATGCCGTCA CCGTCAGCCA CGCCAGGGCT GTTGCGTTCT TGCTCGTCTG CGGGCTGCTG CTGTTTTTGC CGGGATTCTT CACGATTCCG CCGATCGATC GCGACGAGGC GCGGTTCGCG CAGGCGACCA AGCAGATGGT CGAGAGCGGC GATTATGTCG ATATCCGCTT CCAGGACGAT GTGCGCTACA AGAAGCCGGT CGGAATCTAC TGGTTGCAGT CGGCTGCGGT TGAAACCGCA TCTGCGGTCG GATTGCCGCG GGCACAGCTG CGCATCTGGG TGTATCGCAT TCCCTCGCTG ATCGGCGCAA TCGGCGCGGT GCTGCTGACC TATTGGACCG CGCTCGCTTT TGTCACGCGG CGTGGCGCGG TGTTCGCGGC GCTCTTGATA TGCTGCTCGG TGTTGCTCGG TGCTGAAGCG CGGCTCGCCA AGACCGATGC CATGCTGCTG TTCACGGTGG TGGCCGCGAT GGGCGCGCTG GCCCGTGTCT ATCTGTCCTG GCAGCGCGGC GAGGATCCTG AGCATCCCCC TTGGGGGCCG CCGGCGATCT TCTGGACGGC GCTGGCCGGC GGCATCCTGA TCAAGGGGCC GCTGATCCTG ATGTTTGCCG GTCTCACGAT CATTGCTCTC GCCATCATGG ATCGCGGCGC GGCGTGGCTG TGGCGTCTGC GGCCCGTCTG GGGGCTGATG TGGATGCTGG TGCTGGTGCT GCCCTGGTTC GTGCTGATCT TCCTGCGTGC CGGAGACACC TTCTTCGCCG ACTCCGTCGG CGGCGACATG TTGAGCAAGA TCGGTGCCCA GGAGTCGCAT GGCGCGCCGC CGGGCCTCTA TCTGCTGCTG CTGTTCATCA CCTTCTGGCC CGGCGCTCCG CTGGCGGCGA TGGCGGCGCC TGCGGTGTGG CGGGCGCGGC GTGAGCCGGG CGCGCAGTTC CTGCTGGCCT GGCTGCTGCC GTCCTGGATC GTGTTCGAGG CCGTCCTGAC CAAGCTGCCG CATTACGTGC TGCCGCTTTA TCCCGCGATC GCGATCCTCA CCGTCGGCGC CCTGGAGCGG CGGGTGTTGT CACGGTCCTG GCTGCGCCGT GGCGCCGCCT GGTGGTTTGC CATTCCTGCC ATCACCTCGG TGGTTGCCGT GATCGGCGCC ATCATCGTCA CGCACCAGCC GGTGTTCCTG GCTTGGCCGT TCGTCGCCGC ATCGCTGATC TTCGGCCTGT TCGCCTGGTG GCTGTATGAC GACGGCCGGG CCGAGCGCTC GCTGCTGAAT GCGGCGGTTG CGGCAATGTT CCTCGCCTTC GTGGTCTACG GCGCGGTGCT GCCGGCGCTG ACGCCGCTGT TCCCGAGCGC GGAGATTGCG CGCGCGCTGC GCAACGTCGT GTGTGTCGGT CCGAAGGCCG CGGCGGCCGG CTTCCACGAG CCGAGCCTGG TGTTCATGAC GGGAACCTCG ACCCAGCTGA CCGACGGCTC AGGCGCCGCC GATTTCCTCA GCCAGGGTAC CTGCCGCTTC GCGCTGGTCG AGCAGCGGAC CGAGCGCGCC TTCGTGCAGC GGGCCGAGGC GATCGGGCTG CGCTACAACG TGGCCAAGCG CATCGACGGC TACAACATCT CGCAGGGGCG GCCGGTCTCG ATCGCGATCT TCCGCTCGGA AGGCACCGAA TAG
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Protein sequence | MVETFARPRF GEPREPKNLV NPGNRLVRMI DAVTVSHARA VAFLLVCGLL LFLPGFFTIP PIDRDEARFA QATKQMVESG DYVDIRFQDD VRYKKPVGIY WLQSAAVETA SAVGLPRAQL RIWVYRIPSL IGAIGAVLLT YWTALAFVTR RGAVFAALLI CCSVLLGAEA RLAKTDAMLL FTVVAAMGAL ARVYLSWQRG EDPEHPPWGP PAIFWTALAG GILIKGPLIL MFAGLTIIAL AIMDRGAAWL WRLRPVWGLM WMLVLVLPWF VLIFLRAGDT FFADSVGGDM LSKIGAQESH GAPPGLYLLL LFITFWPGAP LAAMAAPAVW RARREPGAQF LLAWLLPSWI VFEAVLTKLP HYVLPLYPAI AILTVGALER RVLSRSWLRR GAAWWFAIPA ITSVVAVIGA IIVTHQPVFL AWPFVAASLI FGLFAWWLYD DGRAERSLLN AAVAAMFLAF VVYGAVLPAL TPLFPSAEIA RALRNVVCVG PKAAAAGFHE PSLVFMTGTS TQLTDGSGAA DFLSQGTCRF ALVEQRTERA FVQRAEAIGL RYNVAKRIDG YNISQGRPVS IAIFRSEGTE
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