Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3806 |
Symbol | |
ID | 5155884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3985248 |
End bp | 3989228 |
Gene Length | 3981 bp |
Protein Length | 1326 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640558645 |
Product | hypothetical protein |
Protein accession | YP_001239789 |
Protein GI | 148255204 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.118242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.620304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAACAA TGCGCAGGTT TCACAGCGCG TCGATCATTG GCTTTTTAAC AATCATTGGA TGTGGACCCA TTGCAAGCGC GTCGTTCGCC CAGAGTTCGC GAGACCTGAT GAACATGTTT GGCGCCATCA TGCAGTCGGC GATGGTTCAA GCGACTCAAA CTGAATGGCG TAAGCTTCCT CCGATCACAT TGACCTGCGT CGACGAGACA CTCCGTCAGC GCGGCATCAG CGTCCAGGTT CTGGTGAATA ACGGTATTGG CCCAACAGAC ACGCGAGTCT CCGACGTCAT CGCAAACTGC CGCGCCCAGG GCGAGCTACG GCAGGCGAAC ACCCGATCCC AACCGGCGCC GGAGCCTGGT CGGATCAGTC CCGCAGTTCC TCAACTGTCT CAGCCCAACG GCGGTCCTTT CAAATATAGA GTGGACAAGG TCCCGCTGGG CAGCACCATT TCGTTCGAAA CGGCCAACTA TAAAGAGTAC CAATGCCGAC CAAGCGACCA GTTTTCCGGC TTCACATGGT GTCAAAAGCA GCGAACTGAG CGCACCTCAC GAGGAGAGTA CCTTTCTTCG TACAGCCTGT TGCACACCGA CGAAGGGCGC GTTTACTACC TGAATCGCTC CCTGGACCCC GCTTTCTTCG ACCCTGGAGA AGCAAACGAG GATATCGATC GTCTGTCGCG GACCTACGGC GAGCAGCCTC GCATCATTTC CAGACCCCAG CGTGCGGCCG GAATGAGCGG CGTTATCGCC TATTGGGGCG ATGTCGTTCT GGAGCAGCTG GATGCAACTG CCATCGCGAC GATCGCTTCG GGCCGCGCCC CTGGAGGCTT ACTCGTCGAT TTCGCAGGAA ACTACCAAGA GTCCATACGT CAGAACCTTC CCATATACCG AGTCTCCGGC GGTCCCGGCT TCGTGTGGGC AGAAAGCCAT GATACCAGTG GGGTTGGGCG ACTGCGCTTC TTCGCTATCG ATGCATCGAC TCTGGCCACA CGACCGACAG TGGGTCCACA GGCGAATGCC AATCTGTCGC CGCAGGTGCC ACCTGACCCC TGGAAAGATT GCCAGTCTTC TGACACTGAA GCGAGGCTCG CCGGCTGTAC TAAAGTGATC GACGCGAAAG GCGCCGACCG AGTACGCCTT GCGGATGCCT TCGATGGCCG CTGCTCCGCC TACAATCAGA AACAAGCATA TCAATCCGCG CTGTCGGATT GTAAGACTGC CATCGATCTG AACCCAAAAT ACTCCTACGC CTACGCCAAT CTCGGCGCGA CGTATTTGGG CCTGAACGAC GCGGCGAACG CCGTATCAGC ACTGAATAAG GCCATAGCCC TAAAGACGAA CTTTATCTGG TCTCGCCTCT CTCGCGCCAA AGCACTCGAA GCCTACGGCT CAAACATGGA TGGCGCGCTA AAAGACTATC AATATGCTCT GCTGATCGAC CCGAGCAATC AGGTAGCCAA AGATGGCGCT GTAAGACTGA CAATGACATT GTCGCCATCG CCGGAAGCTG CAGCTTCGTG CTTGGGCGAC ACAAACAAGC AGACCGCGCA TATCGCGGAA GGCACAACTG CAGCGCCTGG GGCAGCCATG GAAATCGCTG TTGCCGCCAT TTCCTCCAGT GCTCAGACCT ACCGTGCCAA GCTGGACGCT CAACTCGCGC AGGTCAACCA GTTGAACCGG GACATGGAGG TTGCCGAGAA GCAACAATCG GCTGTCACAC AGCCAGCCGA CGAGCGCCGA AAGCTCTTGA TGGACGTGCA GAAACTGAGC GATGGTGTCA CCGAAAGTCA GGCTCGGCTG GATGCCATCT CTGAAAAGGT CACTGAGCGC GAGCGCGAAC TCAAAGCAGA ATCAACCAAA GCTCGGCAGC GGGAGATAAA GCAGGAGCTA GAGCGACTGC GGCCGGCGTT GACTGCCGCC GAGCAGGACC TCAATCGACG CTCTCTGGAG CGCGACGAGG CATATTCAAT AGCTCAACAA CGAGGCACGG ATATCGCGAA GGCGCTGGCA CGATCCGAGT CCATCCGCGC TGCCAAAGAA GGCGCTGAGA GCTGCGCAAG GCAAATCCGA GCGGGCATCG ATGCACTCGA GCAAAAGGTA GACGAAATCC GGCAGCAGCA AAGGGAAGAA GCTGCAAACG CTGTGCGCGT CAACGCCGAG AACACACTGA GCGACTTGTC TGAGTTCGCG CAAAAGAACG CCAGCCTGGT GCCCCTTGAA GTGGGACCGC TTGTCGCCGC TTTAAAGGCG ACGCTAAGCG CCAAAGATCC AAGCAAGACG TCAGACGCGC TCTCCGCCTT ACAACGTCGT CTCGAAGAAA TTCCGGAGTT CAAGCGCTTT CGAACTTCTC GGGAAGAAGC GCGCCAGGAA TCCGCGAGGG CCGAGCTGGA TCAACTCTCT GATACGGCGC GAACAATTTC TGACTTTTCT GAAAGTTACG CAAAGCGGAA CATTACCTCC GATAACGTGC AGCCTCTCAT CAAACTGAAA GCACGCCTGT CTGAAGTGCT CGTCCGTCCG GAAACAAATG CTCTCAAGCA AGCCATTTCC GAATCCGAGC GAGAATTGGC CCAATTGCAC CTCGAACAGG CCTACCACGA CTATCGGGCC AAACATCCGA TACAAAGTCG GAATTCTCTG CCAGCGGCAA CCGACCGTAA CCGTCTGCTC GTGGACGGCC CCCTGGATGA AACCTTGATC CTCGTGAACG AAAGCGGCCA AGCGAGCGTG GTGAGAAATA TCCGCGGTGA CCTCGTATTC GACCGCGGCA GCGCAACATT GTGCTTTCTG CATGACGCCA ACCTCGACGC CTTCGGCATG TCCGAGCTCA AAGCCAAAAT CTCCGAGAAA GGTGTCCGTA CGTTCGAGAT ATCAGCATCG CCATGCGCGG CAGATCGGCT GGAGCGCTAC GATCTCGTTG CCGTCAACAG AGGTCTGTTT GCGACACTCC CGGCCAATCT TGCGAGCTCC ATTCTGAAGG CGGTCGACCG AGGTCTTTTC ACGCTGCTTG GGAGCCTGAG CGACCGCGAG TTGCAAGCCG CGAGGAATGC CGACAGCATC AAGAGTCTTC AACTCGAGAA CGATCTACAA AAACGAGTCA TCGACGGATT CGGTCTCGTC TCGATTGCAA ACGGAACTTC CGTCGTGTGT CAAACGGTCT CCGATCACCA GAAGACCCAT GAGAGCCTTG TCACTCGCGC CGCTGATCGA CTGCAGATTG AGCTTGGCTC CGCGCCGAAG GTCATTTCCA CTTCGATCGA GACCGCCTTT GTATCGACCA AGCGCGGTCA GTGCGGGGCG ATTTATAGCT CTTCCAAGGA CTTGCGCGAT TTGATTACGG GCTTGCAGCG CGACAAACTC AACTATCATG TCCTGCCGAT TTGGTTCACT GCCGTCGACG TTGAGGCGGA GACGAAGAAT GTCGCTGAAG CCGAAGCGAG ATCGTTGCGC GAAGAACAGC AATTGGATCA GAGGAGAAAG GATGATCAAT TGCGCGCCGA ACTCCAACGG CGGCAATCCG GTGAGGAGAA GCGCGATCGG CAAGATAAAC TGCAGAAGGA GAACGGCGCG TTAGCGCGAG GGCTACAGGA GCTCATAACG GATCGCATTA AGGAATTTGC GGAGAAGAGC GATCGCGCCG ACAGGACCTA TGTGAGGCAG TGGTGGCCGA CATTGGCGAC ATGGTACCTG GAGCAGATTG CCAACGACTG GGAACTTGAA AGCGTGGCCA GCGAATTGCG CGACTATGGA ACGGTGAAAT GGAAGAATCG GATTCTTGAA GCTGGTTTCG TCGCGCTCAC ATTCAAGGTG AAGAACAGAG CACTGGGTGA GCACCAGCAG AAGTGCTTCA CCGTCGGGTA CATCGCAGAC CGCGAATTTG AGGTTGCCCG AGATCCGATC GCAGTGCCCT GCGAAGATGA AGTCGCAATC AACCGGTATA GGACCGCGCG CGACTTCTCA AGTAAGTGGC TAGCCAACTG A
|
Protein sequence | MTTMRRFHSA SIIGFLTIIG CGPIASASFA QSSRDLMNMF GAIMQSAMVQ ATQTEWRKLP PITLTCVDET LRQRGISVQV LVNNGIGPTD TRVSDVIANC RAQGELRQAN TRSQPAPEPG RISPAVPQLS QPNGGPFKYR VDKVPLGSTI SFETANYKEY QCRPSDQFSG FTWCQKQRTE RTSRGEYLSS YSLLHTDEGR VYYLNRSLDP AFFDPGEANE DIDRLSRTYG EQPRIISRPQ RAAGMSGVIA YWGDVVLEQL DATAIATIAS GRAPGGLLVD FAGNYQESIR QNLPIYRVSG GPGFVWAESH DTSGVGRLRF FAIDASTLAT RPTVGPQANA NLSPQVPPDP WKDCQSSDTE ARLAGCTKVI DAKGADRVRL ADAFDGRCSA YNQKQAYQSA LSDCKTAIDL NPKYSYAYAN LGATYLGLND AANAVSALNK AIALKTNFIW SRLSRAKALE AYGSNMDGAL KDYQYALLID PSNQVAKDGA VRLTMTLSPS PEAAASCLGD TNKQTAHIAE GTTAAPGAAM EIAVAAISSS AQTYRAKLDA QLAQVNQLNR DMEVAEKQQS AVTQPADERR KLLMDVQKLS DGVTESQARL DAISEKVTER ERELKAESTK ARQREIKQEL ERLRPALTAA EQDLNRRSLE RDEAYSIAQQ RGTDIAKALA RSESIRAAKE GAESCARQIR AGIDALEQKV DEIRQQQREE AANAVRVNAE NTLSDLSEFA QKNASLVPLE VGPLVAALKA TLSAKDPSKT SDALSALQRR LEEIPEFKRF RTSREEARQE SARAELDQLS DTARTISDFS ESYAKRNITS DNVQPLIKLK ARLSEVLVRP ETNALKQAIS ESERELAQLH LEQAYHDYRA KHPIQSRNSL PAATDRNRLL VDGPLDETLI LVNESGQASV VRNIRGDLVF DRGSATLCFL HDANLDAFGM SELKAKISEK GVRTFEISAS PCAADRLERY DLVAVNRGLF ATLPANLASS ILKAVDRGLF TLLGSLSDRE LQAARNADSI KSLQLENDLQ KRVIDGFGLV SIANGTSVVC QTVSDHQKTH ESLVTRAADR LQIELGSAPK VISTSIETAF VSTKRGQCGA IYSSSKDLRD LITGLQRDKL NYHVLPIWFT AVDVEAETKN VAEAEARSLR EEQQLDQRRK DDQLRAELQR RQSGEEKRDR QDKLQKENGA LARGLQELIT DRIKEFAEKS DRADRTYVRQ WWPTLATWYL EQIANDWELE SVASELRDYG TVKWKNRILE AGFVALTFKV KNRALGEHQQ KCFTVGYIAD REFEVARDPI AVPCEDEVAI NRYRTARDFS SKWLAN
|
| |