Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3688 |
Symbol | |
ID | 5153903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3850532 |
End bp | 3851419 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558528 |
Product | metallo-hydrolase/oxidoreductase domain-containing protein |
Protein accession | YP_001239674 |
Protein GI | 148255089 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.19933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTATC CCATCGATCT GCGCGTGCAG CCCAAGGTGG CGGGCTTCTT CGATCCGGAA ACCAGCACGA TCAGCTACGT CGTCAAGGAT CCGTCGTCCA CCGCCTGCGC GATCGTCGAC CCCGTCCTTG ACATCGACTA TGCGGCGGGC CGCATCGGCA CGCGGTCGGC CGACATGCTG ATCGACTATG TGACGCTGAA CGGCCTGCAG CCGGAATGGC TGATCGAGAC GCACGCCCAC GCCGATCATT TGTCCGCCGT GCCCTACATC CAAGGCAGGA TCGGCGGCAG GATCGGCATC GGCGAGCATA TCCTGACTGT CCAGGAGACC TTCGGCAAAG TGTTCAACGA AGGCACCGAG TTTCGCCGCG ACGGCAGCCA GTTCGATCGG CTGTTCAAGG ATGGCGAGAC CTACACGATC GGCCAGATGA CGGCATTCGT CATGCACACG CCGGGGCACA CCCCCGCCTG CACCACCCAT GTCATGGGGA ATGCAGCCTT TGTCGGCGAT ACCCTGTTCA TGCCCGATGG TGGCACCGCA CGCGCCGACT TCCCGGGCGG CAATGCGCGC ACGCTGTTTC GCTCGATCCG GACCATCCTT GAAACCCTGC CGCCCGAGAC CCGGCTGTTC ATGTGTCATG ACTACGGGCC GAACGGCCGG GCCGTGCGCT GGGAGACGAC CGTAAGCGAC GAACGGGTGC ACAACATCCA TGTGCGGGAC GGCATGACCG AGGACGCGTT CGTCGCGCTC CGCGAGGCCC GCGACAGGAC GCTAGGCATG CCCCGCCTGA TCATTCCCTC GCTGCAGGTC AACATCCGCG CCGGCCATTT CCCGCCTGCG GACACGAGCG GAAAGGTCTT CCTGAAGGTG CCGATCAACG TGCTCTGA
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Protein sequence | MSYPIDLRVQ PKVAGFFDPE TSTISYVVKD PSSTACAIVD PVLDIDYAAG RIGTRSADML IDYVTLNGLQ PEWLIETHAH ADHLSAVPYI QGRIGGRIGI GEHILTVQET FGKVFNEGTE FRRDGSQFDR LFKDGETYTI GQMTAFVMHT PGHTPACTTH VMGNAAFVGD TLFMPDGGTA RADFPGGNAR TLFRSIRTIL ETLPPETRLF MCHDYGPNGR AVRWETTVSD ERVHNIHVRD GMTEDAFVAL REARDRTLGM PRLIIPSLQV NIRAGHFPPA DTSGKVFLKV PINVL
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