Gene BBta_3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3573 
Symbol 
ID5151527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3731159 
End bp3732718 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content68% 
IMG OID640558423 
Productputative methylmalonyl-CoA decarboxylase alpha chain 
Protein accessionYP_001239569 
Protein GI148254984 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.784997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGC AGCCGGAGCT CGAGGAACTG GCCCGGCGCG AAGCCTTCGC GCGGGAGATG 
GGCGGGCCTG ACAAGGTCAA GCGTCAGCAC GACCAGGGCC GCCTGACTGT CCGCGAGCGC
ATCGACGGCG TCGTCGATGC CGGCAGCTTC CACGAGATCG GCGCCGTCGC CGGTCTCGGC
GAATATGACG AGCAGGGCGA GCTGAAACAT GTGACGCCCG CCAATTGCGT GTTCGGACGT
GCCCGCATCG ACGGCCGCAC CGTCGTCGTG GTCGGCGACG ATTTCACTGT GCGCGGCGGC
TCGGCCGATG CGTCGATCGC CGCCAAGCCG CTGATGGCGG AGGAGATGGC GCACGATTTC
CGTCTGCCCA TCATCCGCAT CATCGAGGGC TCCGGCGGCG GCGGCTCGGT CAAGACGATC
GAGACCAAGG GCGCGGCCAA TCTGCCCGGC GGCATCGGCG GCAATCGCTG GTATCGCTAC
ACGACCGAGA ACATGTCGCT GGTGCCGGTG GTCGCGCTCG GCCTCGGCTC GGTCGCAGGC
CTCGGCGCCG CGCGGCTTGC CGCCAGCCAC TATTCGGTGA TGACCAAGCA ATCGGCGATG
TTCGTCGCCG GTCCCCCGGT GGTGAAGCGG CTCGGCCAGG ACCTCGGCAA GATGGAGCTC
GGCGGCGCCG ACATCCAGAC CCGCGCCGGC GGCGTCGATC ATGCGGTCGA CACCGAGGCG
GAAGCCTTCG CCTGCGCGCG CCGCTTCCTG TCGTATCTGC CGTCGTCGGT GTACGAACTG
CCGCCGACCT TGCCCTGCAC CGACGATCCG CAGCGCACCG ACGAGCAGTT GATCAGCGCC
GTGCCGCGGG ATCGCCGTCG GGTCTACAAG ATGCGGCCGA TCATCGAGTC CGTGGTCGAC
AGCGGCTCGT TCTTCGAGGT GGCGCAGAAC TACGGCCGCC CGATCATCAT CGGACTCGCG
CGTCTCGAAG GCCGCGCGGT GATGGTGCTC GCGAGCGATC CCTATCACTA TGGTGGCTCA
TGGACGGCGG ATGCCTGCCA GAAGGTGATC CGCTGGGTCG ACTTTGCCGA GACGTTCCAT
CTGCCGATCG TCTATCTGAT GGATTGCCCG GGCTTCATGG TCGGTCTCGA GGCCGAGAAG
GCGGCGACGA TTCGCCACGG TGTGCGCGCG ATGGCGGCGG TCAACCAGTC GACGGTACCG
TGGTGCACGG TGATCGTACG CAACTCGTTC GGTGTTGCGG GCGTCGTGCA TCAGCCGGCC
GACCGCTTCT CGATCCGTTA CGCCTGGCCA TCGGCCTATT GGGGCTCGCT GCCGCTCGAA
GGCGGCATCG AGGCCGCCTA TCGTGCCGAG ATCGATGCCG CGCCGGATCC GAAGGCCAAG
CTCAAGGAGA TCGAGGAGCG GCTGAACAAG CTGCGCTCGC CGTTCCGCTC GGCCGAGAAG
TTCTGGGTCG AGGAGATCAT CGACCCGCGC AAGACGCGCG CGCTGCTCTG CGAGTTCGCG
CGCCTCGCCG AGCCGTTGCG GACGGTCGGT CCGCCGACCG CGATGACGAC GCGGCCATGA
 
Protein sequence
MSWQPELEEL ARREAFAREM GGPDKVKRQH DQGRLTVRER IDGVVDAGSF HEIGAVAGLG 
EYDEQGELKH VTPANCVFGR ARIDGRTVVV VGDDFTVRGG SADASIAAKP LMAEEMAHDF
RLPIIRIIEG SGGGGSVKTI ETKGAANLPG GIGGNRWYRY TTENMSLVPV VALGLGSVAG
LGAARLAASH YSVMTKQSAM FVAGPPVVKR LGQDLGKMEL GGADIQTRAG GVDHAVDTEA
EAFACARRFL SYLPSSVYEL PPTLPCTDDP QRTDEQLISA VPRDRRRVYK MRPIIESVVD
SGSFFEVAQN YGRPIIIGLA RLEGRAVMVL ASDPYHYGGS WTADACQKVI RWVDFAETFH
LPIVYLMDCP GFMVGLEAEK AATIRHGVRA MAAVNQSTVP WCTVIVRNSF GVAGVVHQPA
DRFSIRYAWP SAYWGSLPLE GGIEAAYRAE IDAAPDPKAK LKEIEERLNK LRSPFRSAEK
FWVEEIIDPR KTRALLCEFA RLAEPLRTVG PPTAMTTRP