Gene BBta_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3498 
SymbolcysS 
ID5149392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3649488 
End bp3650906 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content65% 
IMG OID640558350 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001239497 
Protein GI148254912 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.354533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGC GTTTGTACGA CACCGCGACG CGGGAGAAGC GCCCCTTCGT GCCGCTCCAT 
CGGAACAATG TCCGCATGTA TGTCTGCGGA CCGACCGTCT ATGACTTCGC CCATATCGGC
AACGCGCGCC CGGTCATTGT CTTCGACGTC CTGTTCCGGC TGTTGCGCCA TCTCTATGGC
GCCGAGCACG TCACCTATGT CCGCAACATC ACGGATGTCG ACGACAAGAT CAACGCGCGC
GCGGCGCGCG ACTTTCCCGG ACTGCCGCTG AACGAGGCCA TCCGCAATGT GACGGAGCTG
ACTGAGCGAC AGTTCCATGA GGATGTCGAC GCGCTCGGGT GCCTCAGGCC GACGATCGAG
CCGCGCGCGA CCGAGCATAT CGCCGAGATG CGCGACATCA TCGAAAGGCT GGTGGCCGGC
GGCTTCGCCT ATGTCGCAGA GGACCACGTG CTGTTCTCTC CAGCCGCCAT GAATGCCGCC
AACAAGGTGC TGCCGCGCTA TGGCGCGCTC GCCAATCGCT CGCTCGACGA GATGATCGCC
GGGGCCCGCG TGGACGTCGC GCCCTACAAG AAGGATGCGA CCGATTTCGT GCTGTGGAAG
CCGTCGAAAC CCGGCGAGCC GTCCTGGCCG TCGCCGGCCG GCATCGCGGC CGAGGGCCGT
CCCGGCTGGC ACATCGAATG CTCTGCAATG TCCTGGAAGC ACCTCGGTGA GACCTTCGAC
ATCCATGGTG GCGGCATCGA TCTCGTATTT CCGCATCACG AGAACGAGGT GGCGCAGAGC
TGCTGCGCCT TCCACACCGC GCGCATGGCC AATGTGTGGA TGCACAACGG CTTCCTGCAG
GTCGAGGGCG AGAAGATGTC GAAGAGCCTC GGCAACTTCG TCACCATTCG GGAGGTCCTG
GCGGATTGGC CGGGCGAGGT CGTACGCCTG AACATGCTCA AGACGCATTA TCGCTCGCCG
ATCGATTGGA CCTTGAGAGG GCTCGAGGAG AGCGCGAAGG CGGTCGATGA TTGGTACCGC
ACGGCGGGCG ATCTGCGCGA AGGCAGGCCT GCGGACGCCG TCATCGAAGC GCTGCGTGAC
GATATCAACA CGCCGTTGAT GGTCGCCGTG CTTCATGGTC TGCGCAATGA GGCAGCTTCT
GGCGGTGTCG ACGATGTGGC GCGCTTCGTC GGGTCGCTGC GATTGTTGGG CTTCCTGGCC
GAAGATGCCG CGCAATGGCG CGCGCGCAAG CAACAGGCCA GCGGCGTCGA TGCGGCGAAG
GTCGAGGGCC TGATTGCCGA GCGCACCGCG GCGCGGGCGC GCAAGGATTT CAAGGAATCC
GACCGTCTGC GCGACGAGCT CGCGGCCATG GGCGTGGTGC TGAAGGACGG CAAGGGCGCC
GACGGCAAGC CGGTCACGAC CTGGGAGATG GCGCGATGA
 
Protein sequence
MELRLYDTAT REKRPFVPLH RNNVRMYVCG PTVYDFAHIG NARPVIVFDV LFRLLRHLYG 
AEHVTYVRNI TDVDDKINAR AARDFPGLPL NEAIRNVTEL TERQFHEDVD ALGCLRPTIE
PRATEHIAEM RDIIERLVAG GFAYVAEDHV LFSPAAMNAA NKVLPRYGAL ANRSLDEMIA
GARVDVAPYK KDATDFVLWK PSKPGEPSWP SPAGIAAEGR PGWHIECSAM SWKHLGETFD
IHGGGIDLVF PHHENEVAQS CCAFHTARMA NVWMHNGFLQ VEGEKMSKSL GNFVTIREVL
ADWPGEVVRL NMLKTHYRSP IDWTLRGLEE SAKAVDDWYR TAGDLREGRP ADAVIEALRD
DINTPLMVAV LHGLRNEAAS GGVDDVARFV GSLRLLGFLA EDAAQWRARK QQASGVDAAK
VEGLIAERTA ARARKDFKES DRLRDELAAM GVVLKDGKGA DGKPVTTWEM AR