| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3473 |
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| Symbol | |
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| ID | 5148787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3627499 |
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| End bp | 3629100 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558325 |
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| Product | putative TRAP C4-dicarboxylate transport system permease, DctM subunit (large permease component) |
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| Protein accession | YP_001239472 |
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| Protein GI | 148254887 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACGC TGGAGATGAT GCCGCCGCTG ATGTTCGGCG GCCTGGTCCT GGCGATGCTG
ATCGGCTTCC CGGTGGCGTT CACGCTCGCC GCCGTCGGCC TGTCGTTCGG CTTTCTCGCC
ATCCATCTGG GCTTCTTCGA CCTGAACTTC CTGCAGGCGA TCCCGGGGCG CATCTTCGGC
AGCGTGCTCG CCAACGACCT GCTGCTCGCG ATCCCCTTCT TCACCTTCAT GGGCGCAATC
CTGGAAAGAT GCGGGCTCGC CGAGGACATG CTGGATTCGA TGGGCCAGCT GTTCGGGCCG
ATCCGCGGCG GCCTCGGCTA TTCGGTCATC ATCGTCGGCT TCATCCTCGG CGCCATCACC
GGCACGGTGG CGGCGCAGGT GATCGCGATG GCGATGATCT CGATGCCGGT CATGATGCGC
TATGGCTACA ACATGCGCTA CATCACCGGC GTGCTGGCGG CCTCCGGCAC CATCACTCAG
CTGGTGCCGC CGTCGCTGGT GCTGATCGTG CTCGCCGACC AACTCGGCAA GTCGGTCGGT
GACATGTATC TCGGCGCCTG GGGCCCGTCG ATCTTCCAGG TCATCCTGTT CGCCGGCTAC
ACCTTCGTGC TCGGCCTGAT CAAGCCGAGC CATGTACCGC CGGTGCCAAA GGAGGCGCGC
ACGCTGACCG GCTGGGCGCT GTGGAAGAAG TGCCTGATGG GCATCATTCC CTCGGCGGTG
CTGATCTTCG TCGTGCTCGG CACCATGATG ATGGGCCTGG CCACCCCGAC GGAGGCCGGC
GCCATGGGCG CGGTCGGCGC CATCGTTCTG GCGGTGATCC ACCATAAGGA GTTCACCAAG
AAGGATCGCA GCATCCTGAT CGTCGGCGTG GTGGCGGCGG GCATCGGCAC CATCGTGGCG
ATGCTGTTCA CCGAGAACCT GGTGTTCAAG CTGTCGTTCG CGATCACCTA TCTCGCAGTG
GCCTGGCTCG GCATCCGTGC GGTGGCTATC CCGGACCTGC GCGACCTGAT CAAGCAGGGC
TACGAGACCA CCATGCGCAT CACCTGCATG GTCACGTTCA TCCTGATCGG CTCGACCTGC
TTTTCGGTGG TGTTCCAGGG CGTGTCCGGC GGCGAGTGGC TGGAGCACCT GCTGACGTCC
CTGCCCGGCG GCGTCTGGGG CTTCCTGATC TTCATCAACG TCTTCATCTT CTTCCTGGCC
TTCTTCCTCG ACTTCTTCGA GATCGCCTTC ATCATCCTGC CGATGATCGC GCCGATCGCG
CAGAAGATCC TGGCCCCCGT GGTGGGCCCG GAGGCCGCGC TGATCTGGTT CGGCGTGATG
CTGTGCGTGA ACATGCAGAC CTCGTTCCTG CATCCGCCGT TCGGCTTCGC GCTGTTCTAC
CTGCGCGGCG TCGCGCCGAA GGAAGTAAAG AGCTCGGACA TCTATTGGGG CGCGATGCCC
TGGATCGGCC TGCAGGCGAT CATGGTGCTG CTGGTGATCG CTTTCCCGAT CACCGTTACC
GGCCTGCTGG ACAAGCCGGT CCAGGTCGAC CTCGACAAGG TCAAGATCGA GGTGCCGCAG
ATCGACCTGC CGCCGCTCGA TTTCGGCCAG CCGAAGCAGT AG
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| Protein sequence | MITLEMMPPL MFGGLVLAML IGFPVAFTLA AVGLSFGFLA IHLGFFDLNF LQAIPGRIFG
SVLANDLLLA IPFFTFMGAI LERCGLAEDM LDSMGQLFGP IRGGLGYSVI IVGFILGAIT
GTVAAQVIAM AMISMPVMMR YGYNMRYITG VLAASGTITQ LVPPSLVLIV LADQLGKSVG
DMYLGAWGPS IFQVILFAGY TFVLGLIKPS HVPPVPKEAR TLTGWALWKK CLMGIIPSAV
LIFVVLGTMM MGLATPTEAG AMGAVGAIVL AVIHHKEFTK KDRSILIVGV VAAGIGTIVA
MLFTENLVFK LSFAITYLAV AWLGIRAVAI PDLRDLIKQG YETTMRITCM VTFILIGSTC
FSVVFQGVSG GEWLEHLLTS LPGGVWGFLI FINVFIFFLA FFLDFFEIAF IILPMIAPIA
QKILAPVVGP EAALIWFGVM LCVNMQTSFL HPPFGFALFY LRGVAPKEVK SSDIYWGAMP
WIGLQAIMVL LVIAFPITVT GLLDKPVQVD LDKVKIEVPQ IDLPPLDFGQ PKQ
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