Gene BBta_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3405 
Symbol 
ID5152971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3553847 
End bp3554194 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content66% 
IMG OID640558262 
Producthypothetical protein 
Protein accessionYP_001239409 
Protein GI148254824 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.580988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCC ACTGCCATTG CGAAGACTGC CGGCGCACCA GCGGCACCGG GCATTCATCC 
CACCTCGCGG TTTCAGCGGA TGAGATCGCC ATCACAGGGG AGACGAAGGC CTATGTCCGG
CCGTCGGCCA GCGGCAATCT CGTGACGCGC GCGTTCTGCC CGGAATGCGG CGCACCGGTG
TTCTCGAAGA ACCCGGCGAT GCCCGGCCTT CTGTTCCTCC GGGCATCGAG CCTGGATGAC
CTTGAAGTGT TCAAGCCGCA GATGCACGTC TGGGCGATGC GGGCGCCGAG TTGGGATGCC
CCGTCCAGCG AGCTTCCGGT GTTCGACAAG ATGCCGCCTG GGATGTGA
 
Protein sequence
MAGHCHCEDC RRTSGTGHSS HLAVSADEIA ITGETKAYVR PSASGNLVTR AFCPECGAPV 
FSKNPAMPGL LFLRASSLDD LEVFKPQMHV WAMRAPSWDA PSSELPVFDK MPPGM