| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3370 |
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| Symbol | |
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| ID | 5155062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3526535 |
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| End bp | 3527758 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558228 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001239375 |
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| Protein GI | 148254790 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.503626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGA CCGGAATCAT CGATCAGTTC CTGGAGACGT TCACCCGCAC GATCGACTCC
GGCTTCGGTC TCGTCAGCGG CGATGTCGGT ATGCTGGCGA CGACGCTGGC TGCGATCGAT
CTCACCCTCG CTGCCTTGTT CTGGGTCTGG GGCCGCGAGG ACGATGTCAT CGCACGCCTC
GTGAAGAAAA CGTTGTTCGT CGGCGTTTTC GCCTATTTGA TCGGCAACTG GAACAGCCTC
GCCCGGATCG TCTTCGAGAG CTTTGCTGGC CTCGGTCTGA AGGCGTCGGG CTCCGCGCTC
TCGGTTGCCG ACTTCCTGCG TCCGGGCAAG ATCGCGCAGG TCGGCCTCGA TGCCGGGCGA
CCGATGCTGC AGGCCACCGC CAATCTGATG GGGTATGTCA GCTTCTTCGA GAATTTCGTC
CAGATCGCGG TTTTGCTGTT TGCCTGGATC GTGGTGCTGC TCGCCTTCTT CATCCTGGCA
ATCCAGCTCT TCGTCACCCT GATCGAGTTC AAATTGACGA CGCTTGCTGG CTTCGTGCTG
ATCCCGTTCG GTCTGTTCGG CAAGACGGCC TTTGCCGCGG AGCGCGTGCT CGGCAACGTG
ATCTCCTCCG GCATCAAGGT CCTGGTGCTC GCCGTGATCG TCGGCATCGG CTCGACCCAG
TTCTCGCAGT TGATCTCGGC CGGCAACGGT GATCCGCCGA CCATCGAAAG CGCGATGACG
CTCGTCCTCG GCGCACTGTC GTTGCTCGGC CTCGGCATTT TCGGTCCCGG TATCGCCAAC
GGCCTCGTCT CCGGCGGACC GCAGCTCGGA GCCTCATCCG CGGCAGGCGC GGCGCTCGCG
GCAGGCGGTC TCGCTGTTGC CGGCGCTGGG CTCATTGCGG GCGGTGCCGG TCTTACCAGT
GCGGCGGCGA CCGGTAGCGG TCGAGGCGCG TCGGCGCTGG GCGGCGCAGT GGTCCGGGCG
CTACGCAGTG GCCGAGAGCC ATCCCCGTCG GAGGCTTCCG TCGCCAGCCC ATTGCGACAG
GCCGCTGCGG CCAACGCGGG CGGCCCTTCG TCCGCAGCTT CGGCGGATGG CGGAGGTTCC
CCATCGGGCT CGCCGCGATG GGCCGAACAG CTGAAGGCAG GCCGGGCCGT CAGTCAGGGC
ACCTCAGCGG CGACACAGGC TGTGCGCAGC GCTGGACAGG GCGGGCAGGG CAGCTCCGTC
GATCTCTCGG AGGACAAACC ATGA
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| Protein sequence | MTGTGIIDQF LETFTRTIDS GFGLVSGDVG MLATTLAAID LTLAALFWVW GREDDVIARL
VKKTLFVGVF AYLIGNWNSL ARIVFESFAG LGLKASGSAL SVADFLRPGK IAQVGLDAGR
PMLQATANLM GYVSFFENFV QIAVLLFAWI VVLLAFFILA IQLFVTLIEF KLTTLAGFVL
IPFGLFGKTA FAAERVLGNV ISSGIKVLVL AVIVGIGSTQ FSQLISAGNG DPPTIESAMT
LVLGALSLLG LGIFGPGIAN GLVSGGPQLG ASSAAGAALA AGGLAVAGAG LIAGGAGLTS
AAATGSGRGA SALGGAVVRA LRSGREPSPS EASVASPLRQ AAAANAGGPS SAASADGGGS
PSGSPRWAEQ LKAGRAVSQG TSAATQAVRS AGQGGQGSSV DLSEDKP
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