Gene BBta_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3261 
Symbol 
ID5153814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3415958 
End bp3418195 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content66% 
IMG OID640558126 
Productputative isoquinoline 1-oxidoreductase beta subunit 
Protein accessionYP_001239273 
Protein GI148254688 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC TCCTCAAGAT CGACCTGTCC GCGGTGATGC CGCTGATCCC TGATCGGGGT 
GTGACCAACC TGTCGCGCCG CCGTCTGCTC GGGCTCGGCG CAGGCGCCTT CGTCCTTGGG
ACGTTGCTGC CGGCGTTCGG TGCGCGCGCA CAGGCCGCCG CGGCTGTGAA GCCGGGCACC
CGCGTGCCGG CGTTCCTCGT CATCGGCCAG GACAACACGG TCAAGCTGCT CAGCCCATTC
GTCGAAGGCG GGCAGGGCAT CAACACCGGG CTCGCCCAGA TCGTCGGTGA AGAGCTCGAT
GTACATCCGA GCCGTTTCGA GGTCGAATGC GCGCCGCCTG GTCCGGATTA CGCCATTCTC
AACGGCCTGC GCCTGACCGG CGGCAGCTTC TCGACGCGGT CGAGCTACGA GGTGATGCGC
AGGCTCGGCG CCAGCGCACG CGACATGCTG ATCCGCGCTG CGGCCGCAAA GCTGAGCGTG
ACGGCGGATA CGTTGACCAC CGACGACGGT TACGTCGTCC ATGCCGGATC AAACCGCCGC
GTGACTTATG GCGAGCTCGC CGAACAGGCG CTTGCGTTGA CGCCGGCCGA GAACGTGGCG
CTGCGCGATC CCGCGACCTT CCGCTATATC CGCCAGCCGA TGGCGCGGCT CGATGTCCGC
GCCAAATCGA CCGGCAAGGC GGTCTATGCG ATCGATCAGA AGCTCGACGG CATGCTGTAC
GCGGCGATCC AGCATGCGCC GGTGCTCGGG ACCGAGCCGG AACGCGTCAG CAACGAGTCT
GCGGTGGCCG CGATGCCGGG CGTCCACGCC GTGCACAGAC TGCCGGGCGC CGTCGCGGTT
ACCGCCGACA GCTGGTATCG CGCGCGCAAG GCGGTCGAGA CGCTGGAGGT GACGTGGTCC
AAGGCGCCGG CGACGGGGTT CGACGCCGTG GCCGCCGACT ATTCGTCGAC GGGCATTCTG
GCCGCGCTGA AAGCGTCGGA CGCGAGCGGC CTGTCCGCCG AGAAGGATGG CGACGTCGCG
GCAGCCTTTG CCAATGCAGC GAAGATCGTT GAAGCCGAAT ATGACGCGCC TTATCTGGCG
CACGGCCAGC TCGAGCCGCC ATCGTCGATG GCGCGCTTCA ATGCCGATGG GACGCTCGAG
CTGTTTGTGC CCAATCAGAT GCCGGAGCTG TTCCAGAGCA TCGCTGCGAA AGTCGGGGAT
GTTGCCCCGG ACAGGGTGAT CCTGCACTCA CCGATGCTCG GCGGCTTTTT CGGCCGCCAC
TTCGCTTACG GCTCGTCCAA TCCGTTCCAG CAGGCAATCC TGCTGGCCAA GGCCACCAAG
CGTCCGGTGA AGGTGTTGTG GTCGCGAGAG GAGGAGTTCA AGATGGACGC GTTGCGTCCG
CTGAGCTTCA GCCGCTTCAA GGCGGCGCTC GACAAGGACG GCATCCCCAT TGCGATCAAG
GTGCGCACCG TGGGCGAGGG GCCGATAGGA CGCTGGTTCG GCGTCACCGC CGGCGGCAAG
GTCGACAGCT CCGCTGTCGA GGGCCTCGTC GAGAAGCCCT ACGCGATTGC CAATCGGAGC
ATGGAATATG TGAAGTTCGC CCATCCCGTG ACGATCGCCT TCTGGCGCTC GGTCGGCCAC
TCCATGAACG ACTACTTCTA TGAAGGCTTC CTGGACGAGA TCGCCGATGC TGGCGGCAAG
GATCCGTATC AGCTGCGCCT CGCGCTGCTA GAGAACAAGC CGCGCCATCT GAAACTGTTG
GAAACCGTCG CCAGGATGTC CGGCGGCTGG AAGCGCGGAC CTTACGAGGC GGAGGGCGGC
AAGCGCGCCC GCGGCGTGGC GCTGGCGTCG CCGTTCGGCT CGGAGACCGC GACCATCGCG
GAGGTCTCGC TGCAGAAAGG CGAGGTGCGT GTCCACAATC TCTGGATCGC GTTCGATCCC
GGCAGCATCG TCAATCCTGC GATCATCACG TCGCAAGTGG AATCGGCGGC GGCGCTCGGC
CTGTCTGCGG CGCTGTTCGA GGAGCTCGTC TACAAGGACG GTCGGCGCCA GCAGCATAAT
TTCGACGACT ATCCGATCCT GTCGCGCAGC GCGATGCCGT CGGTGCATGT CGAGATCGTC
GAGAGCGGCG CCCCGATGGG CGGTGTCGGT GAGCCCGGCC TGCCCGGAAT TGCGCCCGCA
GTCGTCAACG CGGTCGCCGC ACTGACCGGG CGGCATGTGC GCAGCCTGCC GCTCGCCAAG
GCAAAGCTCG GAGTCTGA
 
Protein sequence
MNALLKIDLS AVMPLIPDRG VTNLSRRRLL GLGAGAFVLG TLLPAFGARA QAAAAVKPGT 
RVPAFLVIGQ DNTVKLLSPF VEGGQGINTG LAQIVGEELD VHPSRFEVEC APPGPDYAIL
NGLRLTGGSF STRSSYEVMR RLGASARDML IRAAAAKLSV TADTLTTDDG YVVHAGSNRR
VTYGELAEQA LALTPAENVA LRDPATFRYI RQPMARLDVR AKSTGKAVYA IDQKLDGMLY
AAIQHAPVLG TEPERVSNES AVAAMPGVHA VHRLPGAVAV TADSWYRARK AVETLEVTWS
KAPATGFDAV AADYSSTGIL AALKASDASG LSAEKDGDVA AAFANAAKIV EAEYDAPYLA
HGQLEPPSSM ARFNADGTLE LFVPNQMPEL FQSIAAKVGD VAPDRVILHS PMLGGFFGRH
FAYGSSNPFQ QAILLAKATK RPVKVLWSRE EEFKMDALRP LSFSRFKAAL DKDGIPIAIK
VRTVGEGPIG RWFGVTAGGK VDSSAVEGLV EKPYAIANRS MEYVKFAHPV TIAFWRSVGH
SMNDYFYEGF LDEIADAGGK DPYQLRLALL ENKPRHLKLL ETVARMSGGW KRGPYEAEGG
KRARGVALAS PFGSETATIA EVSLQKGEVR VHNLWIAFDP GSIVNPAIIT SQVESAAALG
LSAALFEELV YKDGRRQQHN FDDYPILSRS AMPSVHVEIV ESGAPMGGVG EPGLPGIAPA
VVNAVAALTG RHVRSLPLAK AKLGV