Gene BBta_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3204 
Symbol 
ID5149122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3354621 
End bp3355685 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content64% 
IMG OID640558069 
Productbranched chain amino acid ABC transporter permease 
Protein accessionYP_001239222 
Protein GI148254637 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.975304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAT TTCTCGGATT GTTTCGTCGT CTCGAAGGCC CGCAGACGCT CGGCCGCGGT 
CCCGCTTTCT GGGCGCTATT CGCGCTCGTG CTCGCCGGCG CGCTGGCCTA TCCGCTGTTC
AGCGACGGCT ACACGGTCGG CAACACCGTC TACTTCTTCG TCTGGGTGTT CATCGCGCTC
AGCCTCAGCC TGATCTGGGG CTATGGCGGT TCGCTGTCAT TCGGCCAGAC CGCGTTCTTC
GGCATCGCCG GTTATGGCTA CGGCATCCTC ACCATCAATT TCGGCGCGTC CTACGGCTTC
ACCTGGATCG CGCTGCTGCT CGCTATCGGC ATGGCCGCAT TGGTGGCGGC GCTGCTCGGC
TATTTCATGT TCTTCGGCCG CATCGGCGGC GTGTTCCTCG GCATCGTCAC GCTCGCCGTG
ACCCTGATGC TCGAACGCTT CATGGCCCAG ACCGCCGGCC CGGAATGGCG CATCGGCGCC
GCGCGGCTGA ACGGCTTCAA CGGCATGAGC GCGATGCCGC CACTGACGAT TCCGTGGTTC
GGCGGGCCGA TCGTGCTGTT CGCCGATGTC GGGCTGTATT ACGTCGTGCT CGCCATGCTC
GTGCTGGTCT ATCTGGCGCT GCGCATCCTG ATGAATTCGT CGTTCGGCAA TGTCATCGTC
GCGATCCGGG AAAATCCCGA GCGGGCCGAG ATGCTGGGCT ACGATATCCG CAAATATCAG
CTGATCACCT TCGTCATCGG AGCGGCGCTC GCCGGCCTCT CCGGCGTGCT CTACACGGTG
TGGGGCCAGT ACATCACGCC CTCCAGCATG GGCATGACGG CGGCCTCACT GCCGCTGATC
TGGGTCGCCG TGGGCGGCCG CAGCGATCTG ACGGCCACCA TCATCGGTAC CTTGGTGGTG
CTCTCCGGCT TTCAGGCGCT GACCATCTAT GGCAGCCAAT ATGCGCTCGT TTTCATGGGT
GTGCTCCTGG TGCTGACGGT GCTGATCGCG CCCAACGGCC TCGTGCTCGG CCTTATCACC
TGGGTCACGA AGCGGGTCGC GCGGCGCAAG CAGGAGACCG CGTGA
 
Protein sequence
MTGFLGLFRR LEGPQTLGRG PAFWALFALV LAGALAYPLF SDGYTVGNTV YFFVWVFIAL 
SLSLIWGYGG SLSFGQTAFF GIAGYGYGIL TINFGASYGF TWIALLLAIG MAALVAALLG
YFMFFGRIGG VFLGIVTLAV TLMLERFMAQ TAGPEWRIGA ARLNGFNGMS AMPPLTIPWF
GGPIVLFADV GLYYVVLAML VLVYLALRIL MNSSFGNVIV AIRENPERAE MLGYDIRKYQ
LITFVIGAAL AGLSGVLYTV WGQYITPSSM GMTAASLPLI WVAVGGRSDL TATIIGTLVV
LSGFQALTIY GSQYALVFMG VLLVLTVLIA PNGLVLGLIT WVTKRVARRK QETA