Gene BBta_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3159 
Symbol 
ID5149826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3309762 
End bp3310586 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID640558027 
Productputative flagellin 
Protein accessionYP_001239180 
Protein GI148254595 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00882995 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0941617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCCA TTTCAACCAA CATCGCCGCC AATTCGGCCG TCCGCTATCT GAACATCAAC 
TCCAATCAGG AGACGAGCTC GCTCTCCAAG CTGTCGAGCG GATCGCGTAT CACCTCGGCC
TCCGACGACG CGGCCGGTCT CGCCATCTCG ACGCGCATTT CCTCGGACAT CACCACGCTG
CAGCAGGCGG CCACCAACGC CGCGCAGGCT ACCTCGATCC TGCAGACCGC CGACGGCGGC
GCCTCCAACA TCAGCGACAT TCTGGCCCGC ATGAAGTCGC TGGCCTCGGA GTCGGCCTCG
GGCACGACGG TCGGCACCAG CCGCACCTAC ATCCAGTCGG AATTCTCGCA GCTGATCAGC
GAAATCTCGT CGATCGCGAC GGGAACGCGC TATAGCGGCC AGAGCCTGCT CGACGGCACC
AGCACCTTCT CAGCCGGCGT CTCGGTGCTG GTCGGTTCGT CCGCCACCGA CACCATCGAC
ATCAAGCTGT CGGATCTCAC GGCGAGCACG CTTGGCGTCT CCTCGCTCGA CGTCAGCACC
CAGAGCGGTG CGACTGCGGC GCTCACGACG CTCGACACTG CGATCGACAC CGTGTCGAAG
GCCCGCGCGG ATATCGGTGC GCAGGAGTCG CGCTTCAACT TCTCGGCCGA TTCAATTTCG
ACGCAGACGC AGAACCTGCA ATCCGCCAAC TCCGCGATCA AGGACGTGGA CATCGCCTCG
GAGCAGGCGA AGCTGTCCTC GGCTCAGGTG AAGACCCAGG CTGCGGTGTC GGCCGAAGCC
GCGGCAAACC AGATCCCGCA GTACCTCCTG AAGCTGCTCG GCTAA
 
Protein sequence
MPAISTNIAA NSAVRYLNIN SNQETSSLSK LSSGSRITSA SDDAAGLAIS TRISSDITTL 
QQAATNAAQA TSILQTADGG ASNISDILAR MKSLASESAS GTTVGTSRTY IQSEFSQLIS
EISSIATGTR YSGQSLLDGT STFSAGVSVL VGSSATDTID IKLSDLTAST LGVSSLDVST
QSGATAALTT LDTAIDTVSK ARADIGAQES RFNFSADSIS TQTQNLQSAN SAIKDVDIAS
EQAKLSSAQV KTQAAVSAEA AANQIPQYLL KLLG