Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3104 |
Symbol | |
ID | 5148822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3252732 |
End bp | 3254123 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640557974 |
Product | putative Beta-lactamase |
Protein accession | YP_001239128 |
Protein GI | 148254543 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTC GCCAGATTGT TTTCGCCGTC GTGCTGCTCG GCGCTTTGGT CCGGTTCGGG CCTGCCACAG CTGAAGATGG CTTCCCAGCA GCGGAGTGGG AGCGCGCCAC CCCTGCACAA GTGGGCTGGT CAGAGACCGA ATTGGCTCAA GCGCGATCCT TTTCGGATCA GATTCGCTCG AGCGCGGTTG TGATCGTTCA GCACGGAAAG GTCGTGGCCG ACTGGGGCAA TACGACAAAG CCGACGGCGC TCGAGTCAAT CCGCAAGAGC CTGCTCAGCG CCCTGATCGG CATCGCAATG TCGGATCACC TGATCAGCCT CGGCAGCACG CTTGGCCAGC TCGGCATCGA CGATCATCCG CCTGGCCTGA CCGGGATCGA GAAGGGCGCG ACGGTGCGCG AACTCCTGCA AGCGCGTTCC GGGGTCTACC ACGCGGCGCT CTACGAGACG CCGGACATGG CCAGGATGAG ACCGCCGCGC GGCAGCCACC CGCCCGGCAC CTTCTGGTAT TACAACAATT GGGACTTCAA CGCGCTCGGC ACGATCTACG AGCACGCAAC CGGCACCGGC ATCTTCGAGG CGCTCGACCG GAAGATTGCA AAGCCGATCG GCATGCAGGA CTACCGGCCA CAGGATGGCA GCTACGTCCG CGGCGAAGCG TCGATCCATC CCGCCTATGC GATCCGCATG AGCGCACGGG ACTTGGCGCG TTTTGCGCTT CTGTATCTGC ACAAGGGCCA TTGGGCCGGA CACCAGATCG TGCCACGGGA GTGGGTGGAT GAGAGCACGC GTGCCTATTC GAGAGCGCCG TCCGGGCTGG GCTATGGCTA TCTCTGGTGG AACGGGTTTC TGGGCGGTGC CGTTGCGCCG ACGGTGACCT TGCCCGAGGG CAGCTTTTGG GCCGAAGGTG CCGGCGGCCA ATACGCCTTG GTTGTGCCCG CACTCGACCT CATCGTGGTG CACCGCGTCG ACCGCGACAC GCCCTCCACC GAACCTTCCA TGCGCAGCAT GGCCAGGTTC TTCTGGCTGA TCCTGAAGGC CGCGGGCCAT GATCCCGGCC CCGACGCCTC GCTCACCGCA GCGACCGGCG AACGACCGAC AGGTGAGACC CTGGCCGCGA CATTCAAGGG CAAGACGCTC AGCTTCGGTG CCAAGCTCAG GAATGGTCCG TTCACAATGC GTTTCGAGCC CGATGGCCGG ATGACCTATC CGCACTGGGA CGAGTCCCTT GGACCTGCAA CCGGGACATG GACGGTCGCG GAGAACAAGC TTTGTATCTT GATCTCGGAG GCCAGACGTC GCTGCTACAT TCCAGTGTTG AACGGTGAAC GGATCGAGTT GTTCGACCAG CTTGGCGTCA TGCAAATCGC CGCGGTGGCG CTGCCGCAGT GA
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Protein sequence | MRIRQIVFAV VLLGALVRFG PATAEDGFPA AEWERATPAQ VGWSETELAQ ARSFSDQIRS SAVVIVQHGK VVADWGNTTK PTALESIRKS LLSALIGIAM SDHLISLGST LGQLGIDDHP PGLTGIEKGA TVRELLQARS GVYHAALYET PDMARMRPPR GSHPPGTFWY YNNWDFNALG TIYEHATGTG IFEALDRKIA KPIGMQDYRP QDGSYVRGEA SIHPAYAIRM SARDLARFAL LYLHKGHWAG HQIVPREWVD ESTRAYSRAP SGLGYGYLWW NGFLGGAVAP TVTLPEGSFW AEGAGGQYAL VVPALDLIVV HRVDRDTPST EPSMRSMARF FWLILKAAGH DPGPDASLTA ATGERPTGET LAATFKGKTL SFGAKLRNGP FTMRFEPDGR MTYPHWDESL GPATGTWTVA ENKLCILISE ARRRCYIPVL NGERIELFDQ LGVMQIAAVA LPQ
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