Gene BBta_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3104 
Symbol 
ID5148822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3252732 
End bp3254123 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content64% 
IMG OID640557974 
Productputative Beta-lactamase 
Protein accessionYP_001239128 
Protein GI148254543 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC GCCAGATTGT TTTCGCCGTC GTGCTGCTCG GCGCTTTGGT CCGGTTCGGG 
CCTGCCACAG CTGAAGATGG CTTCCCAGCA GCGGAGTGGG AGCGCGCCAC CCCTGCACAA
GTGGGCTGGT CAGAGACCGA ATTGGCTCAA GCGCGATCCT TTTCGGATCA GATTCGCTCG
AGCGCGGTTG TGATCGTTCA GCACGGAAAG GTCGTGGCCG ACTGGGGCAA TACGACAAAG
CCGACGGCGC TCGAGTCAAT CCGCAAGAGC CTGCTCAGCG CCCTGATCGG CATCGCAATG
TCGGATCACC TGATCAGCCT CGGCAGCACG CTTGGCCAGC TCGGCATCGA CGATCATCCG
CCTGGCCTGA CCGGGATCGA GAAGGGCGCG ACGGTGCGCG AACTCCTGCA AGCGCGTTCC
GGGGTCTACC ACGCGGCGCT CTACGAGACG CCGGACATGG CCAGGATGAG ACCGCCGCGC
GGCAGCCACC CGCCCGGCAC CTTCTGGTAT TACAACAATT GGGACTTCAA CGCGCTCGGC
ACGATCTACG AGCACGCAAC CGGCACCGGC ATCTTCGAGG CGCTCGACCG GAAGATTGCA
AAGCCGATCG GCATGCAGGA CTACCGGCCA CAGGATGGCA GCTACGTCCG CGGCGAAGCG
TCGATCCATC CCGCCTATGC GATCCGCATG AGCGCACGGG ACTTGGCGCG TTTTGCGCTT
CTGTATCTGC ACAAGGGCCA TTGGGCCGGA CACCAGATCG TGCCACGGGA GTGGGTGGAT
GAGAGCACGC GTGCCTATTC GAGAGCGCCG TCCGGGCTGG GCTATGGCTA TCTCTGGTGG
AACGGGTTTC TGGGCGGTGC CGTTGCGCCG ACGGTGACCT TGCCCGAGGG CAGCTTTTGG
GCCGAAGGTG CCGGCGGCCA ATACGCCTTG GTTGTGCCCG CACTCGACCT CATCGTGGTG
CACCGCGTCG ACCGCGACAC GCCCTCCACC GAACCTTCCA TGCGCAGCAT GGCCAGGTTC
TTCTGGCTGA TCCTGAAGGC CGCGGGCCAT GATCCCGGCC CCGACGCCTC GCTCACCGCA
GCGACCGGCG AACGACCGAC AGGTGAGACC CTGGCCGCGA CATTCAAGGG CAAGACGCTC
AGCTTCGGTG CCAAGCTCAG GAATGGTCCG TTCACAATGC GTTTCGAGCC CGATGGCCGG
ATGACCTATC CGCACTGGGA CGAGTCCCTT GGACCTGCAA CCGGGACATG GACGGTCGCG
GAGAACAAGC TTTGTATCTT GATCTCGGAG GCCAGACGTC GCTGCTACAT TCCAGTGTTG
AACGGTGAAC GGATCGAGTT GTTCGACCAG CTTGGCGTCA TGCAAATCGC CGCGGTGGCG
CTGCCGCAGT GA
 
Protein sequence
MRIRQIVFAV VLLGALVRFG PATAEDGFPA AEWERATPAQ VGWSETELAQ ARSFSDQIRS 
SAVVIVQHGK VVADWGNTTK PTALESIRKS LLSALIGIAM SDHLISLGST LGQLGIDDHP
PGLTGIEKGA TVRELLQARS GVYHAALYET PDMARMRPPR GSHPPGTFWY YNNWDFNALG
TIYEHATGTG IFEALDRKIA KPIGMQDYRP QDGSYVRGEA SIHPAYAIRM SARDLARFAL
LYLHKGHWAG HQIVPREWVD ESTRAYSRAP SGLGYGYLWW NGFLGGAVAP TVTLPEGSFW
AEGAGGQYAL VVPALDLIVV HRVDRDTPST EPSMRSMARF FWLILKAAGH DPGPDASLTA
ATGERPTGET LAATFKGKTL SFGAKLRNGP FTMRFEPDGR MTYPHWDESL GPATGTWTVA
ENKLCILISE ARRRCYIPVL NGERIELFDQ LGVMQIAAVA LPQ