Gene BBta_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3048 
Symbol 
ID5149645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3184024 
End bp3184986 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID640557920 
Producthypothetical protein 
Protein accessionYP_001239074 
Protein GI148254489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.442334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAT CATCGCTGTT CCCCGGCTTC GACGGGTTGC TGACGCTGTC GCGCCGCGAG 
GGCGTCGACA TCAAGCCCAC TCTGCTGCGT GTCCTGACCG ACCTCTATGT CCAAGCGAGC
ACCCATTCGG CGGATGAGGA GCGGCAATTC GTCGAGTTGG TCTCGCGATT GGTCGACGAC
GTCGATGACG CGACCCGCGC GGCCGTCCGC GCCCGCCTCG CGATCTATCC GGGTACACCG
ATCGAGATCC TGACGAAGCT CGGACTGCGG CCGGCGCAGA ATGAAGCGAT GCTGCCCTTG
GCCGGACCTA TTCCGTCGGC GCTCCGCGCA TCTCCGCTCA AAGCTCCCGC ACGCGAGGAC
ACCCCGTCCG CCGGATTGAC GATGCAGCCG CGTGATGCGG CCGAGCTCAG CGAGATGTTC
CTGCGCGCCG GCGTCAAGGA GCGCATCGCC ATCCTGGAGA ACCTCGCCAC CGCGCCGCTG
CGGCCTGCAG CGCCCACACC GCCGCATCGC GCGCTGAATG CAATCGAGGC TTTGGAGATG
GCGGCCTTCA ATGCGGACGT GGAGACGTTC ACGTTGGAGC TCGGCGAAAG CCTGCTGCTT
CCGGCACGCA TCACGCAGGA GGTGATGAAC GATGCGAGCG GCGAGCCGCT CGCCTGCGCG
GCAAAGGCGC TCGGCATGCC GGGCGCGGCA TTCGAACGCG TGCTGCTGTT CCTCAAGCCC
GAGATCGGCC AGTCGGTCGA GGCCGTCTTC AGATTGTCGC GGCTCTACGA GCGCCTCAGC
GAGCAGGCAG CCTTGATCAT GCTGGCGGCC TGGCGTGGCT CGGCGATCGC GGCGATCCGG
GCGAAGCATC GCCCGGCTCT CTATGATGAC GAACGGCAGA ATGTCCGCGC AAGCACGCCG
CGCACAGCGC AAGGTTCGCC GCGGCCGATC GTGCGCACCG TCAGCGAGGG CTTCAAGCGC
TGA
 
Protein sequence
MTRSSLFPGF DGLLTLSRRE GVDIKPTLLR VLTDLYVQAS THSADEERQF VELVSRLVDD 
VDDATRAAVR ARLAIYPGTP IEILTKLGLR PAQNEAMLPL AGPIPSALRA SPLKAPARED
TPSAGLTMQP RDAAELSEMF LRAGVKERIA ILENLATAPL RPAAPTPPHR ALNAIEALEM
AAFNADVETF TLELGESLLL PARITQEVMN DASGEPLACA AKALGMPGAA FERVLLFLKP
EIGQSVEAVF RLSRLYERLS EQAALIMLAA WRGSAIAAIR AKHRPALYDD ERQNVRASTP
RTAQGSPRPI VRTVSEGFKR