| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2891 |
|---|
| Symbol | |
|---|
| ID | 5153175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2997772 |
|---|
| End bp | 2998674 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640557770 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_001238924 |
|---|
| Protein GI | 148254339 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.183278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0672791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGACA AGCGTCCCCG CTCCTTCTAC ATCCTCGCCG CGTTCTTCTC GGCCTATGTG
CTGTTCCTGT ACGGGCCGAT GATCGCGATC TACATCCTGT CGTTCCAGGG CCCGGATGGC
GGCCTGACGT TCCCGATGAA CGGCGTGTCG CTCACCTGGT TCGGCAAGGT GTTTTCCGGC
GGCGGCATTG TCGACATCGG CGCGGCCTTC AAGCGCTCGC TGGCGCTCGG CCTGGTGGTG
ATGGTCATCA CGGTGGTGCT GTCGGTGGCC GCCGGCATGG CCTTCCGCAA GCCGTTCCGC
GGCGCTTCGA TCCTGTTCTA CACCGCGATC GCCAGCCTGA TCATGCCCTC GATCATCACT
TCGCTCGGCA TCGCCTTGGA ATTCCGCCTG ATCGACGATT TCGTCAACAA GCACGGCGCC
AATGTCGGCC TCGGCTGGCT CGCCGACGGC TACACCACCG CCATGGGCCT GTTCACGTCG
GGTCTCGGCG CGCATCTGAC CTGGACCTTG CCGTTCGGCC TCCTGATCAT GTTCGCGATC
TTCAACCGCT TCGATGGCCG GCTCGAGGAA GCCGCGCGCG ACCTCGGCGC CACGCCGTGG
CAGACCTTCC GCCACGTCGT GCTGCCGATC ATCCTGCCCT CGGTCGTCGG CATCGGCCTG
TTCGGCTTCA CGCTGTCCTG GGACGAACTC GCCCGCTCCA GCCAGGCGAT CGGCTCCGTG
AATACGCTGC CGCTGGAATT GCAGGGCCTG ACGACGACCG TGACCAAGCC CGACATCTAC
GCGCTGGGCA CACTGACCTC GGCGGTGTCC TTCGTCGTCA TCTTCGCGGC GCTATCAGTG
ATCCTGGTGC TGCAGGCCCG CCAACGGCGA CAGGGGTCTG ATGCGGGCAA GGGGATGGTG
TGA
|
|---|
| Protein sequence | MGDKRPRSFY ILAAFFSAYV LFLYGPMIAI YILSFQGPDG GLTFPMNGVS LTWFGKVFSG
GGIVDIGAAF KRSLALGLVV MVITVVLSVA AGMAFRKPFR GASILFYTAI ASLIMPSIIT
SLGIALEFRL IDDFVNKHGA NVGLGWLADG YTTAMGLFTS GLGAHLTWTL PFGLLIMFAI
FNRFDGRLEE AARDLGATPW QTFRHVVLPI ILPSVVGIGL FGFTLSWDEL ARSSQAIGSV
NTLPLELQGL TTTVTKPDIY ALGTLTSAVS FVVIFAALSV ILVLQARQRR QGSDAGKGMV
|
|---|
| |