| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2788 |
|---|
| Symbol | fixJ |
|---|
| ID | 5151173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2882853 |
|---|
| End bp | 2883470 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640557673 |
|---|
| Product | response regulator FixJ |
|---|
| Protein accession | YP_001238827 |
|---|
| Protein GI | 148254242 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0210669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0766422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAC GGGCCAAGGT CTATGTGATC GATGACGACG AGGCGATGCG GGATTCGCTC
AACTTCCTGC TCGATTCCTC CGGCTTCGAG GTGGTTCTGT TCGAGCACGC GCAGTCGTTT
CTCGAGCACC TGCCCTCGCT CAGCTTCGGT TGCGTGGTGT CGGACGTACG GATGCCCGGC
ATTGACGGCA TCGAACTGCT GAAGCGCATG AAGGCGGCTG GCAGCAGCTT CCCGATTCTG
GTGATGACCG GCCATGGCGA CGTCCCGCTC GCGGTCGAGG CGATGAAACT CGGCGCGGTG
GACTTCCTCG AAAAGCCGTT CGAGGACGAG CGGCTCGTGG CGATGATCGA GACGGCAATC
CGACAGGCCG AGCCGGCGGC GAAGAACGAA TCGATCACGC AAGACATCCT CGGCCGCATC
GCCAGCCTGA GCCCCAGGGA GCGGCAGGTT ATGGACGGAT TGATGGCCGG CCTCTCCAAC
AAATTGATCG CGCGCGAGTA CGACATCAGT CCGCGCACCA TCGAGGTCTA CCGCGCGAAC
GTGATGACCA AGATGGGCGC GAACAGCCTC TCCGAGCTGG TGCGGCTGGC GATGCGCGCT
GGCGCTTTGA AGGATTGA
|
|---|
| Protein sequence | MAERAKVYVI DDDEAMRDSL NFLLDSSGFE VVLFEHAQSF LEHLPSLSFG CVVSDVRMPG
IDGIELLKRM KAAGSSFPIL VMTGHGDVPL AVEAMKLGAV DFLEKPFEDE RLVAMIETAI
RQAEPAAKNE SITQDILGRI ASLSPRERQV MDGLMAGLSN KLIAREYDIS PRTIEVYRAN
VMTKMGANSL SELVRLAMRA GALKD
|
|---|
| |