Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2716 |
Symbol | rbsC |
ID | 5153436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2810774 |
End bp | 2811871 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640557608 |
Product | high-affinity D-ribose ABC transporter membrane protein |
Protein accession | YP_001238762 |
Protein GI | 148254177 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.139094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCC CGTCGGAGAC GCCCGTGGCG AGCAGCGAGG TCACTTTCAC CAATGTCGGC GCTATCAGAT GGTGGCATCG CGGCCTGTTC GCGTCGCAGA CAGCCTATGT GACCCTGGCG CTGATCGCGC TCATCATCCT GATGAGCTTC GCGAGTCCCT ATTTCCTGAC CGAGGGGAAT CTGCAGAACG TCGCCAAGAA CTTTTCCTTC ATCGCCATCG CCACGCTCGG CATCACCTTC GTGATCATCA CCGGCGGCAT CGACCTGTCC GTCGGCTCAC TGATGTGCTT CGCGGCGATG ATCACCTCGA TGGTGATGAC GACGCTGTCG ACCCCCGGCG CGCCGCTGTC GTCGCTGTTC GTGCATCTGG CCGCCGACGG CAAGACCGTG GTCGCCAATG TACCCGGCCT GATCCTGGTC GTGTCGGTGC TCGCGGGCCT CGTAGTGTCG GTGCTCGTCG GCCTCGTCAA CGGCATGTGC ATCGCCATCC TCGGCCTGTC GCCATTCGTG ACCACACTCG GCATGCTGTC GATCGTGCGC GGCCTCTGCT ACGTGATCTC CAACGGCAGG GGCAGCTTTC CCGGCGGTCC GGACGCCGAG TATTTCTACG CGCTCACCCA AGGCGACTTG TGGGGCCTGC CGGCGCCGTT CATCTATCTG GTCATGCTCG CGCTGGTGAT GGCCGTGGTG CTGCATCACA GCGCGTTCGG CCGCCACGTG TTCGCGATCG GCGGCAACGA GAAGGCCGCG GAGCTCACCG GCATCTCGGT GACGCGGGTC AAGATTGAGG TCTATGTGAT CGGCGCGCTC GCCGCCGGGC TGCAGGGCAT CATCATCTCC GGCTGGCTCG GCTCGGCGCC GGCCAACATG GCGACATCCT ACGAGCTCAA CGTGATCGCG GCCGCGGTGA TCGGCGGCGC CAATCTGGCC GGCGGCATCG GTGGTCCGCT CGGTGCGATC GTCGGCTGCG TGCTGCTCGA AGTGATCCGC AACGGGCTGG TGCTGGCGCA GGTCAACTCC TATTGGCAGC AGACGCTGGT CGGCGTGATC ATCATCGCCG CGGTGCTGGT CGACCGCATT CGCGCGCGGC TGATGTGA
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Protein sequence | MSVPSETPVA SSEVTFTNVG AIRWWHRGLF ASQTAYVTLA LIALIILMSF ASPYFLTEGN LQNVAKNFSF IAIATLGITF VIITGGIDLS VGSLMCFAAM ITSMVMTTLS TPGAPLSSLF VHLAADGKTV VANVPGLILV VSVLAGLVVS VLVGLVNGMC IAILGLSPFV TTLGMLSIVR GLCYVISNGR GSFPGGPDAE YFYALTQGDL WGLPAPFIYL VMLALVMAVV LHHSAFGRHV FAIGGNEKAA ELTGISVTRV KIEVYVIGAL AAGLQGIIIS GWLGSAPANM ATSYELNVIA AAVIGGANLA GGIGGPLGAI VGCVLLEVIR NGLVLAQVNS YWQQTLVGVI IIAAVLVDRI RARLM
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