| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2584 |
|---|
| Symbol | |
|---|
| ID | 5154086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2674973 |
|---|
| End bp | 2676169 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640557489 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001238643 |
|---|
| Protein GI | 148254058 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0375347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CTCTCGATCT CGATCGACCG GCAGCCGCGC GCCCCGATCC GCGTGATGAG
GCGCGGCGGC TGGCGCACCT GTTCAGCGGA TCGGCTGCCG AGCTCGATCG TTCCGGTGCG
TTTCCGCGCG CCAATATCGA GGCTCTCAGT GCGGCCGGTC TGTTGAACCT CGTGATCGGA
CGCGAGCACG GCGGACATGG CGCCGGCCTC AGGCTGGCGC GCGACATCAT CTCGGAGATC
GCGCGCGGCG AGCCTTCGAC CGCCTTGATC GTGGCGATGC ACTATCTCAA TCACGCAGCG
ATCCGCTACA GCCGTCGTTG GCCGGATCAT CTCGCAAGGC AGCTCGTTCG CGACAGCCTG
TGCGGACCGG CCCTCGTCAA TGCGCTGCAG GTCGAACCCG GAGCAGGATC TCCGTCCTAC
GGCACGCTGC CGCGCACCAT CGCGCGCCGA ACAGAGACCG GGTGGCGTTT GACCGGCCGC
AAGACATTTG CAACAGGCTG CGAGGGCCTC GCATGGTTCA TTGTCCTGGC GGTCACTGAC
GAGCCCCAGC CGCGGATCGG CTCCTTCGTG GTGTCGCATC TCAGTCCGGG GATTCATATC
GAAAGGACCT GGGACACGGT CGGCATGCGC GCGACCGGCA GCCACGACGT CACCTTCCGC
GACATCGCTG TCCCGCACGC CGACGTGCTC GACCTTGCCC CGGCCTCGGA GGGCATCAGG
CGCGACGAGC AGCAGACGGC CTGGTTCATG CTGCTGATCG GCGCCGTCTA TCACGGTATC
GCCCTGGCCG CGCGCGATGA CGTGCTGGCC TTTGCCCTCG ACTTCAGGCC CGGTGACCTC
AAGGAGCCGT TGTCGTCGCT GCCGCGAATT CAGGACGAAC TGGGCGCGAT CGAGGTTCTG
CTGATCAGCA ACGAGCGACT GTTGAACTCG GTGGCTCGCG ACTTTGACGA GGACGTGCCG
ATCGGGCCCG ACAGCGGCGC CGTCCGCCAT GCCGTCATCG AAAACGCCAT TCGGGTGGTC
GACCTCGCCC TGACGATCGC CGGCAACGCC GGCGTGTCAC GCAACCACGC CCTCGAACGT
CACCACCGCA ACGTCATTTG CGGACGCACC CACGCGCCGA CCGGACCGCT GGTGCGTGCC
GCGGCTGCCA GGGCGGCGAT TAGCCGGGCC GTCAAGACTC GAACCGCTTC AACATGA
|
|---|
| Protein sequence | MTDALDLDRP AAARPDPRDE ARRLAHLFSG SAAELDRSGA FPRANIEALS AAGLLNLVIG
REHGGHGAGL RLARDIISEI ARGEPSTALI VAMHYLNHAA IRYSRRWPDH LARQLVRDSL
CGPALVNALQ VEPGAGSPSY GTLPRTIARR TETGWRLTGR KTFATGCEGL AWFIVLAVTD
EPQPRIGSFV VSHLSPGIHI ERTWDTVGMR ATGSHDVTFR DIAVPHADVL DLAPASEGIR
RDEQQTAWFM LLIGAVYHGI ALAARDDVLA FALDFRPGDL KEPLSSLPRI QDELGAIEVL
LISNERLLNS VARDFDEDVP IGPDSGAVRH AVIENAIRVV DLALTIAGNA GVSRNHALER
HHRNVICGRT HAPTGPLVRA AAARAAISRA VKTRTAST
|
|---|
| |