| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2438 |
|---|
| Symbol | |
|---|
| ID | 5151941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2525887 |
|---|
| End bp | 2526756 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640557356 |
|---|
| Product | allophanate hydrolase subunit 1 |
|---|
| Protein accession | YP_001238511 |
|---|
| Protein GI | 148253926 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.549141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC GCTACTCGTT CGGGGGTGAC GAGCATCTCT TCGTCGAATG CGACGAGGCG
ATGTCGCTCG ACGCCTTCTT CAAGAGCCTG TCGATGACCA ACGCGATCCG CGACGCCGCC
ATCAAGGGCG TCACGGAGAT CTGCCCGGCC AATGCCTCGT TCCAGATCAA GTTCGATCCG
GACGTGATCA AGCCGGGCGA CATTCTGAAA GAGGTGCAGG GCATCGAGAG CGCGGCCGCG
AAGACTGAGC CCGTCATCAA GACCCGCATC ATCGAGATTC CGGTGTTCTA TCAGGACCCC
TGGACGCACG AGACCCTGAT GCGCTTCCGC GAGCGGCACC AGGACCCGAC CGCGACCGAT
CTCGAATATG CCGCCCGCGT CAACGGCCTC GCCGATGTCG ACGCCTTCAT CAAGGCGCAT
AGCGGCTCGC CCTGGTTCGT CTCGATGGTC GGCTTCGTCG CGGGCCTGCC GTTCATGTAC
CAGATGGTCG AGCGTCAGAA GCAGCTCCAG GTGCCGAAAT ATCTGCGGCC CCGGACCGAC
ACGCCGAAGC TGACGATCGG CCATGGCGGC TGCTTCTCCT GCATCTATTC GGTGCGCGGC
GCCGGCGGCT ACCAGATGTT CGGCATCACG CCGATGCCGA TCTTCGATCC CGAGCAGAGC
ATCTCGTATC TGCGCGACTT CATGGTGTTC TTCCGCCCCG GCGACATCGT CAAGTTCAAG
CCGATCAAGC AGGACGAATA TGACCACGCG CTCGGCGATG TCGCCTCCGG CCGCTTCGCG
CCTGTCATTC GCGACGTCAC CTTCGACTTC CGCGATTTCC AGAAGGACAT GACCGGCTAC
AACGCCAAGC TGGAAGGAGC GCTGGCATGA
|
|---|
| Protein sequence | MTTRYSFGGD EHLFVECDEA MSLDAFFKSL SMTNAIRDAA IKGVTEICPA NASFQIKFDP
DVIKPGDILK EVQGIESAAA KTEPVIKTRI IEIPVFYQDP WTHETLMRFR ERHQDPTATD
LEYAARVNGL ADVDAFIKAH SGSPWFVSMV GFVAGLPFMY QMVERQKQLQ VPKYLRPRTD
TPKLTIGHGG CFSCIYSVRG AGGYQMFGIT PMPIFDPEQS ISYLRDFMVF FRPGDIVKFK
PIKQDEYDHA LGDVASGRFA PVIRDVTFDF RDFQKDMTGY NAKLEGALA
|
|---|
| |