| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2348 |
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| Symbol | ispE |
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| ID | 5149923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2436649 |
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| End bp | 2437554 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640557270 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001238426 |
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| Protein GI | 148253841 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.269687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.185975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGCGT CCACGGTCAC CGGCGCGCCG CTGCAGGAGC AGGGCCGTGC CAAGGTCAAT
CTGACATTGC GGGTCGTCGG CCGTCGCGTC GACGGCTATC ACGATCTCGA AAGCGTCGTC
GCCTTCGCCG ATTGCGCGGA TCAGCTCACC CTGGTCCCTG GGCCGGAGCT GACGCTGACC
ACCACCGGGC CTCTTGCCGC GGCCTGCGGT GAGACCTCCG ACAATCTGGT GCTGAAGGCG
GCGCGCCTGC TGGCCGAGTC CGTTCCCGGC CTGAAGCTCG GCGCATTCGA ATTGGAGAAG
GTGCTGCCCG TCGCGGCCGG CATCGGCGGC GGCTCGGCGG ATGCGGCCGC CGCGCTGCGG
CTGCTCGCCA GACTGAATGG CCTCTCGCTT GATGATCCGC GTCTGCAGGC GGTGGCGCTG
AAGACCGGGG CCGACGTGCC GGTCTGCGTG CCCTCGCGGG CCTGCACCAT GACCGGCGTC
GGCGAGAATC TGCAGCCGCT CGCGCTGCCT GTCCTGCCCT GCGTGATGAT CAATCCGCGC
GTGCCGGTGG CGACCAAGGA CGTGTTCCAG GCGCTCGGTC TCAAGCCGGG TGATCTCCTG
GTTGGCGTGA CCGACGTTCT CACCGCGCCG TCCTGGCCAA CGGCTGGGGC GTCCATCGGC
GATTGGGTCT CCGCGCTCGA CCAGGTCAAG AACGATCTCG AGCCCCCGGC GCTCAAAGTG
CAACCGATCA TCGGCACCGT GCTCGACGCG CTGCGCGCAA GCCACGGCGT GCTGCTGGCC
CGGATGTCCG GCTCCGGTGC GACCTGCTTT GCGATCTATG GCAGCGAGGC CGATGCAAAG
GCCGCGGGCG CACAAATCAG CGCTGATCAC CCGGAGTGGT GGGTGCACGC GGGCACTCTG
AGTTAG
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| Protein sequence | MLASTVTGAP LQEQGRAKVN LTLRVVGRRV DGYHDLESVV AFADCADQLT LVPGPELTLT
TTGPLAAACG ETSDNLVLKA ARLLAESVPG LKLGAFELEK VLPVAAGIGG GSADAAAALR
LLARLNGLSL DDPRLQAVAL KTGADVPVCV PSRACTMTGV GENLQPLALP VLPCVMINPR
VPVATKDVFQ ALGLKPGDLL VGVTDVLTAP SWPTAGASIG DWVSALDQVK NDLEPPALKV
QPIIGTVLDA LRASHGVLLA RMSGSGATCF AIYGSEADAK AAGAQISADH PEWWVHAGTL
S
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