Gene BBta_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2348 
SymbolispE 
ID5149923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2436649 
End bp2437554 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID640557270 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_001238426 
Protein GI148253841 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.269687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.185975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCGT CCACGGTCAC CGGCGCGCCG CTGCAGGAGC AGGGCCGTGC CAAGGTCAAT 
CTGACATTGC GGGTCGTCGG CCGTCGCGTC GACGGCTATC ACGATCTCGA AAGCGTCGTC
GCCTTCGCCG ATTGCGCGGA TCAGCTCACC CTGGTCCCTG GGCCGGAGCT GACGCTGACC
ACCACCGGGC CTCTTGCCGC GGCCTGCGGT GAGACCTCCG ACAATCTGGT GCTGAAGGCG
GCGCGCCTGC TGGCCGAGTC CGTTCCCGGC CTGAAGCTCG GCGCATTCGA ATTGGAGAAG
GTGCTGCCCG TCGCGGCCGG CATCGGCGGC GGCTCGGCGG ATGCGGCCGC CGCGCTGCGG
CTGCTCGCCA GACTGAATGG CCTCTCGCTT GATGATCCGC GTCTGCAGGC GGTGGCGCTG
AAGACCGGGG CCGACGTGCC GGTCTGCGTG CCCTCGCGGG CCTGCACCAT GACCGGCGTC
GGCGAGAATC TGCAGCCGCT CGCGCTGCCT GTCCTGCCCT GCGTGATGAT CAATCCGCGC
GTGCCGGTGG CGACCAAGGA CGTGTTCCAG GCGCTCGGTC TCAAGCCGGG TGATCTCCTG
GTTGGCGTGA CCGACGTTCT CACCGCGCCG TCCTGGCCAA CGGCTGGGGC GTCCATCGGC
GATTGGGTCT CCGCGCTCGA CCAGGTCAAG AACGATCTCG AGCCCCCGGC GCTCAAAGTG
CAACCGATCA TCGGCACCGT GCTCGACGCG CTGCGCGCAA GCCACGGCGT GCTGCTGGCC
CGGATGTCCG GCTCCGGTGC GACCTGCTTT GCGATCTATG GCAGCGAGGC CGATGCAAAG
GCCGCGGGCG CACAAATCAG CGCTGATCAC CCGGAGTGGT GGGTGCACGC GGGCACTCTG
AGTTAG
 
Protein sequence
MLASTVTGAP LQEQGRAKVN LTLRVVGRRV DGYHDLESVV AFADCADQLT LVPGPELTLT 
TTGPLAAACG ETSDNLVLKA ARLLAESVPG LKLGAFELEK VLPVAAGIGG GSADAAAALR
LLARLNGLSL DDPRLQAVAL KTGADVPVCV PSRACTMTGV GENLQPLALP VLPCVMINPR
VPVATKDVFQ ALGLKPGDLL VGVTDVLTAP SWPTAGASIG DWVSALDQVK NDLEPPALKV
QPIIGTVLDA LRASHGVLLA RMSGSGATCF AIYGSEADAK AAGAQISADH PEWWVHAGTL
S