Gene BBta_2191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2191 
SymbolhemC 
ID5153490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2266014 
End bp2266991 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID640557123 
Producthydroxymethylbilane synthase 
Protein accessionYP_001238279 
Protein GI148253694 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACGTT TCCGGATCGG CACCCGCAAG AGCACGATGG CGTTGGCGCA GACGGAGGAA 
ATCGCACGCC GTCTGCAGGC GGCAATTCCC TCGCTCGACA TCGAGATCGT CAAATTCGAG
ACGACAGGAG ATTCCGACCA GACCAGCAAG CTCTTGACCC ATGGCGGCAA GGGCGGGGCA
TTCGTGGCCG AAATTCGCCG TGCGATGCTG GACGGCAGAC TGCATGCGGC GATGCATTCG
TTGAAGGACA TGCCGGGCAA TGAAGAGACC CCGGGCCTGG TCATCGCGGC GCTGCTCTCG
CGTGATCCGC CAGGCGACGT GCTGGTCTTG CGGCGCGGGC TGTCGTTGGA CGAATTCCGC
AAGGATGGCG GCCGTGGCTT CAAGATCGGC ACAAATGCGG TTCGCCGCGC CGCCTATGCG
CGGCGGCTGT TCCCGCAGGC CGAGCTCATC CATTTCCGCG GCGCGGCCGA TACCCGTATC
CGCAAGCTCG ACAATGGCGA GCTGCAGCGG CTTCCCGATG GCGGGGCGGT CGGACCGGCG
GATGCTCTGA TCATGGCGCG GTCCGGCCTG GAGCGTGTCG GTCTCTCCGA CCGCGCCTCG
TTCGACTTCG CGGCCGCCGA TATGCTGCCA GCGGTTGGGC AGGGCATCGT CGCGGTCGAG
TGCCCGTCCC TGGATTGGGA GACGCGGCGC ATCCTCGCGA CGATCGACGA TGGCGCAGCG
CGAAGCTGCG CCGACGCGGA GCGCGAGGTG CTGTGGGTGC TCAATGGGCA CTGCAATTCG
CCGATCGCGG GCTTCGCGAC CATCGACGGG GACCAGATGA CCTTGACCGC CTCAGTGCTC
GACGAGGATG GCGGCCGCTT CATCGAAGCC CAGCGCGCCG GTCCCGCTGA TCGCCCCCGC
GAGCTTGGCC GCACGGTCGG GCTCGAACTG CTTGCCAACG GCGCGGCCGA GCTGATCGAG
CGCAGCCGGC CGCGTTAG
 
Protein sequence
MTRFRIGTRK STMALAQTEE IARRLQAAIP SLDIEIVKFE TTGDSDQTSK LLTHGGKGGA 
FVAEIRRAML DGRLHAAMHS LKDMPGNEET PGLVIAALLS RDPPGDVLVL RRGLSLDEFR
KDGGRGFKIG TNAVRRAAYA RRLFPQAELI HFRGAADTRI RKLDNGELQR LPDGGAVGPA
DALIMARSGL ERVGLSDRAS FDFAAADMLP AVGQGIVAVE CPSLDWETRR ILATIDDGAA
RSCADAEREV LWVLNGHCNS PIAGFATIDG DQMTLTASVL DEDGGRFIEA QRAGPADRPR
ELGRTVGLEL LANGAAELIE RSRPR