Gene BBta_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2105 
Symbol 
ID5155285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2177013 
End bp2178242 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content66% 
IMG OID640557042 
Productputative N-isopropylammelide isopropylaminohydrolase 
Protein accessionYP_001238198 
Protein GI148253613 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA TCATTCGCAA CGCGGTGCTG GCGCAGCAAG GCGAGCTGCG CTGCGCCGAT 
ATCGGAATTT CCAAAGGCCG CATCGCGGCA ATCGCGCCGT CGCTGCAGGC CGACGGTGAG
GCGCGCGACG CCGAGAATTG CCTCGTCGTG CCAGGCTTGA TCGAGACGCA CATCCATCTC
GACAAGACCT GCATCCTTGA TCGCTGCACG ATCCGGGAAG GTACGGTCGC CGAGGCCGTG
CGCGAGACCG CGGCCGCCAA GCGCAATTTC ACCGCCGAGG ATGTCTATGC CCGTGCGAAG
CAGACCGTGG AGCGCTGCGT CAGCCACGGC ACGATGCGCA TGCGCACCCA TGTCGAGCTC
GATCCCGGCA TCGGCTTCGT TGCGTTCGAG GCGATCCAGC AACTGGCGCG CGACTATGCC
TGGGCGCTCG ATCTGGAGAT CTGCGTCTTC CCGCAGGAAG GCCTGACGAA CTATCCAGGC
ACCGAGGAAC TGCTCATCGA AGGCCTGCGC CGCGGTGCGC GCACCATCGG CGCCGCGCCC
TATTTCGACA GCGATCCGCC GGCGCAGATC GACCGCATCT TCGCCATCGC GCGTGACTTC
GATGTCGACA TCGACATGCA TCTCGATCTC GCCGAGACGC TCGACCACAT GCAGATCGAA
TATGTCTGCC GCAAGACCGA GGACTATGGC TGGGGTGGCC GCGTCGCGGT TGGCCATGTC
ACGCAGCTGT CACTGCTGCC GCCCGAGCGT TTCCAAACGA TCGCAACGCA GCTTGCCAAT
GCCGGCGTCG CGGTCACCGT GCTGCCGTCA ACCGACCTGC ATCTGATGGG CCGCCGCCAG
GATCACGCCA TCCCGCGCGG CGTGGTGCCG CTGCAGCCGC TCCGCGACAA GGGCGTGACG
TGCTCGCTCT CGACTAACAA CGTGCTCAAC CCGTTCACGC CCTATGGCGA CGGCTCGCTG
ATCCGCATGG CCAATCTCTA CGCCAATGTC TGCCATGTCT CGCGGCCCGA TCATCTCGCC
GGCTGCCTCG ATATGGTGAC TCATGATGCG GCGAAATTGA TGCGGCTCGG CGACTACGGC
ATCGCTGTCG GCGCGCCGGC CGACCTCGTC TGCATCGATG CTGCTGATCC AACCGAGGCG
GTGGCGACCC TGGCGCAGCC GCTGTGGGGC CTCAAGCGCG GTCGGCCGTC GTTCTCGCGC
ACGCGGCCCG TGCTGCATCG GCCGGGCTGA
 
Protein sequence
MDLIIRNAVL AQQGELRCAD IGISKGRIAA IAPSLQADGE ARDAENCLVV PGLIETHIHL 
DKTCILDRCT IREGTVAEAV RETAAAKRNF TAEDVYARAK QTVERCVSHG TMRMRTHVEL
DPGIGFVAFE AIQQLARDYA WALDLEICVF PQEGLTNYPG TEELLIEGLR RGARTIGAAP
YFDSDPPAQI DRIFAIARDF DVDIDMHLDL AETLDHMQIE YVCRKTEDYG WGGRVAVGHV
TQLSLLPPER FQTIATQLAN AGVAVTVLPS TDLHLMGRRQ DHAIPRGVVP LQPLRDKGVT
CSLSTNNVLN PFTPYGDGSL IRMANLYANV CHVSRPDHLA GCLDMVTHDA AKLMRLGDYG
IAVGAPADLV CIDAADPTEA VATLAQPLWG LKRGRPSFSR TRPVLHRPG