Gene BBta_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2071 
Symbol 
ID5153560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2143699 
End bp2145180 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content68% 
IMG OID640557008 
Producthypothetical protein 
Protein accessionYP_001238164 
Protein GI148253579 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.555824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACCG TTGCCGTCGG CATTCTGGCC GCGCTGCTTG TCGGCTGGCT GTTCGCCGCG 
CCCGGCGACG ATATCTCGGT TGTGGAGAAG GCGCGGCTTG TCAGCGAGCA ACTGGCAGCC
GACATCGTCG CGCGTCTGCG CGGGGCGCCG GTCTCGGAGA ATGAGCAGCG TTCGATTCTG
TCGGACATCT CGGCGCTCGA AGGCACGCTC GACCTGCATG GTGCTGGCTC ACGCCGGCGA
CGACGGCTGG TTCGGAAGAT CCGCGCGCTG CTGGCGGCGC AGGTCTCGGC CGTGCTGTGG
CTGCGCTCGG AGGACAGCCG GGCCATCGAT GCCGCGATGG CGGACTCGCT GGCGCGAACA
GACATGTCCG AGACCGGAGT TTCCGTGCCG GCGCTGCAGC GGTTGGGCGA GGCCGCGGCC
GCCGCGAATC CGCATGAACC ATTGGCGTCG GTCCTGAATG ACCTCGCCGC GGCGACAAGC
AATCTGGCTG ATCTCGACGG ACGCCCTGCT GCCGAACTGC TTTTGCATCG CGATTGGATG
CTGGCGCGCC GCGCGATGTT GCGCACCCTT GTCGCGATGC TGGCCGCGGG TCTGGTCTGG
CTCGCAACCG GCTGGGAGAT GGGCGGCTTC ATGATGCTCG GCACGGCGAT CATGCTGTCG
GTCTTCTCGA CCTTCGAGAA ACCGGCTGCC ATCCTGCCTC ACGTGCTCGC AGGGCAGGTG
CTGGGGACGG GCCTCGCCCT GATCTGCCGC TGGCTGATCT GGCCATACGT CGGTGGATCG
CTCGGGGCGG TGCTGGCGAT GGTCCCCTTC ATCTTGCTCG GTGCGCCGCT GTCGGCGCAT
CGCCTGACCC AGCGCATGGC GTTCGACGTC AACATGGTGC TGTTGCTGAT GCTGCAGCCG
ACCTGGCCGC AGACCATGAG CTTCGGGCAT TCGCTGATGG CTAGCCTTGC CGTGGTCGCC
GGACCCGTGG TCGCGCTGAT TGCCTTCAGC CTGATCTATC CTGTCGACAG TCGCCGGCGC
TATGAGGCGG TCAGATATTC GATGATCGAC GATCTCGAAC ATCTCGCGGC CAGCGCCCTG
CGATCGGATC GCCGCAAGCG ATGGCGCGCG CTGCTGCATC ACCGCGTCCT GCTCGCCACC
TATTGGGGCG AACGGGCCTC GTATCCGACT GCGCGCCTGG CCGACGATGC CCTGGCGTTG
CTGTATGTCG GACAGGCGAT CGAGCAACTC GGCGAACTCG CTGCAAGCGG AACGTCGCCG
GGCGCCAGAC GGCGCTGCAC GGCGACGCTG GAGCGGCTGC ACCGCATCGG CACGGATCCG
CTGCGCGCGG CCCGCGCCTT GCTCGATGCC GTGGGCCGGC TGCCGGCCGA GATGTCCGGC
TGCAGACCGA TTCTGACGCG GGCGGCGGCC CAGCTTGCAG AACGCCCTGC AGCCTTTCGC
AAGATGGCCG CCGGCGCCGG TGCTAGCTCG CCGCGGCGTT GA
 
Protein sequence
MLTVAVGILA ALLVGWLFAA PGDDISVVEK ARLVSEQLAA DIVARLRGAP VSENEQRSIL 
SDISALEGTL DLHGAGSRRR RRLVRKIRAL LAAQVSAVLW LRSEDSRAID AAMADSLART
DMSETGVSVP ALQRLGEAAA AANPHEPLAS VLNDLAAATS NLADLDGRPA AELLLHRDWM
LARRAMLRTL VAMLAAGLVW LATGWEMGGF MMLGTAIMLS VFSTFEKPAA ILPHVLAGQV
LGTGLALICR WLIWPYVGGS LGAVLAMVPF ILLGAPLSAH RLTQRMAFDV NMVLLLMLQP
TWPQTMSFGH SLMASLAVVA GPVVALIAFS LIYPVDSRRR YEAVRYSMID DLEHLAASAL
RSDRRKRWRA LLHHRVLLAT YWGERASYPT ARLADDALAL LYVGQAIEQL GELAASGTSP
GARRRCTATL ERLHRIGTDP LRAARALLDA VGRLPAEMSG CRPILTRAAA QLAERPAAFR
KMAAGAGASS PRR