| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2005 |
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| Symbol | hupK |
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| ID | 5150434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2070104 |
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| End bp | 2071210 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640556946 |
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| Product | hydrogenase expression/formation |
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| Protein accession | YP_001238102 |
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| Protein GI | 148253517 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.432728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGG CGTTTCGCAA CCACATCGAT GTCACGCTGT CGGTTGCAGC TCAGATGATC
GTCGGTGTCA CGATCGAACC GCGCTCGCGG CCGCCGCTCG GTCGGCTGTT TGCCGGCAAG
CCGGCCGAGA CGCTGCTGGC GGCGTTACCG CGGCTGTTCT CATTATGCGC CATCGCGCAT
CAGGTCGCCC TTTTGTCTGC GCTCGAAGCT GCACGTGGCC ATCAGGCGCC GCCGCTGACG
CGGCATCGGC GCATCACCGC CGTGATCATG GAGCGGTTCG CCGAGTTGCT GCGTGGCGTT
CTGGTCAGCC GTCTCGCTTG CGATCGCAGC GCCCTGGCGC AGCTGCAGTT TCTGCTGCAG
GCGGTGGCCT CGCTCCAGGT GTCCGCGGGC GCCGGAAACG CGCGGCAATC TCGCAGCGCA
ACCTTGTCGC AGATCAAGAT GGCCCTGGCC GCCCTGGGTT TAGGATCGGT TGCGGAACCC
GTGGTGCGGG GAACTCCGCT TGCGTCGATC ATGGATGCGG CCCGCAGGGC CGAAGCCGAT
GGAGGATGGA AGCAGATGCC GGCCGAGCAC GGTGTCCTGT CGGCCGCCGA CGATGACACC
GTCGTGGCTC GACTGATCGA TCCGCAGGCC GCCTTCGCCG AGGCGCCCGA ACTTGCCGGG
CGTGTTCCGG AAACCGGAGT CTGGGCGCGG CAAGCATCGC GTCATCGGCA TTCATCCGCG
GGGTCCGTCG AGCGGCTCTT GGCAAAGTTG GCCGAACTCG CCGAGCTGCT GTGCTGGATC
GAAGCCGGCG AGGCCGAAGA TGAAGCGGCC GACCAGGACG TCGTTGCAAG CTATGCGCTC
GGCCCAGGGC GCGGTGCGGC GGCCGTCGAA TGCGCGCGCG GCCGGCTGCA TCACGCGATC
GAGCTGGATG CGGAAGGCCG TGTCCGCCGG TTCGAATTTC TCGCGCCGAC CGAATGGAAT
TTTCATCCCC GCGGCCCGGT TGCCGGCAGC CTGACTGGGG CTCGGCTTTG CGGCTCCGCC
GATCGTGCCG CGATCGAGGC GATGATCAGT TCCTTCGATC CCTGCGTCGG CTACAGTCTC
GCGGTACGGG AGATGGCTGA TGCATGA
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| Protein sequence | MTLAFRNHID VTLSVAAQMI VGVTIEPRSR PPLGRLFAGK PAETLLAALP RLFSLCAIAH
QVALLSALEA ARGHQAPPLT RHRRITAVIM ERFAELLRGV LVSRLACDRS ALAQLQFLLQ
AVASLQVSAG AGNARQSRSA TLSQIKMALA ALGLGSVAEP VVRGTPLASI MDAARRAEAD
GGWKQMPAEH GVLSAADDDT VVARLIDPQA AFAEAPELAG RVPETGVWAR QASRHRHSSA
GSVERLLAKL AELAELLCWI EAGEAEDEAA DQDVVASYAL GPGRGAAAVE CARGRLHHAI
ELDAEGRVRR FEFLAPTEWN FHPRGPVAGS LTGARLCGSA DRAAIEAMIS SFDPCVGYSL
AVREMADA
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