| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1940 |
|---|
| Symbol | |
|---|
| ID | 5151646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2003468 |
|---|
| End bp | 2004394 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640556883 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238039 |
|---|
| Protein GI | 148253454 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TGGTCACGGG TGCCGCGGGC TTCATTGGCC GTGCGCTGCT GCAACGGCTG
CTGGTCGATA CGGACGGGGC CGACATCACC GGGCTCGATC TCGTCGCAGC GCCGCCGGAA
GCGTTGGGTG CGCGTCTGTC CTGGATCAGC GGCGGCCTGG ACGACCGCGC CGTGCTGGAG
CAACTCGGCG CTGCGTCGTT CGACCGCGTG TTCCATCTCG CCAGCGTGCC CGGCGGCCGC
GCCGAGGTCG AGCCTGCGCT CGGTCGCCGC GTCAATCTGG ATGCGTCGCT CGATCTCCTG
CAGTTGCTGG CCCAGCATGG CAACCGGCCG CGCGTGGTCT ATGCCAGCAG CATCGCCGTC
TATGGCGCGC TGTCCGGCGC GCCGGTCAGC GCGCAGACGG AGGCGCGGCC CCTGATCAGC
TATGGCGCGC ACAAGCGGAT GGTGGAGATC GCGCTCGCCG ATCACACCAG GCGCGGAGAG
CTGTCAGGCA TCGCGCTGCG GCTGCCCGGC ATCGTCGCAA GGCCGCGACC GGTGAGCGGC
TTCGGCTCCG CCTTCATGAG CGAACTGCTG CATGCGGTGT CCGCGGGCGA GAGCTATGCC
TGCCCGGTGT CACGGGACGC GACCGCCTGG TGGCTGTCGG CCAAAGTCGC GGTCGACAAT
CTCATCCGCG CCGGCGAGAT TGATGTCTGC GGCACTCTGC AACTCCCGGC GCTTCGACTT
TCGATCGCCG AGGTGATGGC AGGCTTGGCG CAGCTCTATG GCGCTGAGCG GCCCGCGCGC
GTGACGTTCG ATCCTGACGA CAGCATCGAG AAGGTGTTCG GACGCTTTCC AATGCTGGAG
GTTGATGCCG AGTTGGCGTT GGGCTTCGCC CATGATGGAT CGGCGGCGGA GATGATCACG
AATGCGCTCC GCGCCGGTTA CATCTGA
|
|---|
| Protein sequence | MRILVTGAAG FIGRALLQRL LVDTDGADIT GLDLVAAPPE ALGARLSWIS GGLDDRAVLE
QLGAASFDRV FHLASVPGGR AEVEPALGRR VNLDASLDLL QLLAQHGNRP RVVYASSIAV
YGALSGAPVS AQTEARPLIS YGAHKRMVEI ALADHTRRGE LSGIALRLPG IVARPRPVSG
FGSAFMSELL HAVSAGESYA CPVSRDATAW WLSAKVAVDN LIRAGEIDVC GTLQLPALRL
SIAEVMAGLA QLYGAERPAR VTFDPDDSIE KVFGRFPMLE VDAELALGFA HDGSAAEMIT
NALRAGYI
|
|---|
| |