| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1905 |
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| Symbol | |
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| ID | 5150596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1965163 |
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| End bp | 1966428 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640556849 |
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| Product | putative ABC transporter substrate-binding protein |
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| Protein accession | YP_001238005 |
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| Protein GI | 148253420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.549817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCAAGG GTGCGGCCGC GCTTGCGGGT GCAGCGGTTG GCTCGGACAT CGTGCCGGGC
GCGCCGACGA TCTGGGCGCA GGAGATCAAG GATATCGAAC TGCGCCATGT CGGCGTGTCC
TATTCGGTGG TGAAGGCGAT CGGTGACCAG GCCGCGAAGG ATCTCGGCTT CAAGGTCACG
ATGCAGAACC TCGATACGTC GGCGGCGATC AACCGTTTCA TCAGCCAGCC GAACAGCGTC
GACATCGCCG ACCTCGAGGG CTGGCAAGCC AAATTGGCCG CCAAGCGCGG CGTCATCCAG
GGCATCGAGG TCAAGAAGAT CAAGGAGTTC GACAACATCC TCCCGATCTT CACCAAAGGT
GAGATCAATG GCAACAAGAT TCCGCGCCAG GGCATTTCGC CCTATGAGGC GATGTACATC
GCCAAGCCCG ATGCGACCGA TCTTCATGAC GGTGTGACCG AGTGGGCGAC CTTCCTGCCA
CAGGTCTACA ATGCCGACTC GATCGGCTAC CGGCCCGATC TCGTCGGCCA CGAGGTGACC
GAGTGGAAGG ACCTGATCGA CCCGAAGTTC AAGGGCAAGG CCGCGATCCT CGACGTGCCC
GCGATCGGCA TCATGGATGC CGCGCTGTGC TTCGAAAGTG CCGGACTGAT CAAGTACGGC
AACAAGGGCA ACATGACCAA GGAGGAGATC GACTTCACCT GCAACAAGCT GATCGAGCTG
AAGAAGCAGG GGCAATTCCG CGCCACCTGG ACCACCTTCG ATCAGTCGGT GCAACTGATG
GCGGCAGGCG AGGTGGTGAT CCAGTCGATG TGGTCGCCGG CGGTGGCCGC GGTGCGCGTC
AAGGAGATCC CCTGCGTCTA CGCGCCTGTC AACGTCAAGA ACGGCAAGGA GGGCTATCGC
GGCTGGTGCA ACGGCATGGG TCTGATGAAG CACCTCACCG GCAAGAAGCT CGACGCCGCC
TATGAGTATC TCAACTGGTA CCTGTCCGGC TGGCAGGGCG GCTTCGTGGC GCGCTACGGC
TATTACAGCC CGGTGCCGTC GACGGCGAAG AAGTTCCTCT CCGCTGCGGA ATGGGATTTC
TGGTACGAGG GCAAGCCCGC GCCGGAGGTC GTGAACGACC CCTATGGCGT GCCGATGGAG
AAGGCCGGCA CCAAGCGCGA CGGCGGCTCG TTCCTCGACC GCGTCACCAA CATCTCCTGC
TGGAATACGC TGATGGACGA GGCTGCCTAC ATGAACAAGC GCTGGAACGA CTTCAAGGTG
GCCTGA
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| Protein sequence | MLKGAAALAG AAVGSDIVPG APTIWAQEIK DIELRHVGVS YSVVKAIGDQ AAKDLGFKVT
MQNLDTSAAI NRFISQPNSV DIADLEGWQA KLAAKRGVIQ GIEVKKIKEF DNILPIFTKG
EINGNKIPRQ GISPYEAMYI AKPDATDLHD GVTEWATFLP QVYNADSIGY RPDLVGHEVT
EWKDLIDPKF KGKAAILDVP AIGIMDAALC FESAGLIKYG NKGNMTKEEI DFTCNKLIEL
KKQGQFRATW TTFDQSVQLM AAGEVVIQSM WSPAVAAVRV KEIPCVYAPV NVKNGKEGYR
GWCNGMGLMK HLTGKKLDAA YEYLNWYLSG WQGGFVARYG YYSPVPSTAK KFLSAAEWDF
WYEGKPAPEV VNDPYGVPME KAGTKRDGGS FLDRVTNISC WNTLMDEAAY MNKRWNDFKV
A
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