| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1644 |
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| Symbol | |
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| ID | 5155821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1719514 |
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| End bp | 1721178 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640556603 |
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| Product | putative thiamine pyrophosphate-requiring enzyme |
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| Protein accession | YP_001237761 |
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| Protein GI | 148253176 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC GCACCACCGG ACGCTCGGCC TTCCTGGCGC TGCTCAAGGA CGAGGGCATC
ACGCATCTGT TCGGCAATCC CGGCACCACC GAATTGCCGA TCATGCACGC GCTCAAGGAC
CATCCGGATC TGACCTACGT CATGGCGATG CAGGAGAGCC TGGTGGTGGC GATGGCCGAC
GGCTTCAGCC GCGCCTCGGG ACGGCTGGTC GCCTGCAACG TCCATGTCGC GCCCGGCCTC
GGCAATGCGA TGGGATCGCT CTACAACGCG CAGTTCACCG GCACGCCGAT GATCCTCACC
GCCGGCCAGC AGGAGCAGGG CCATGGCCTG ATGGAGCCGC TGCTCTATGG CCCGCTGGTG
CGCATGGCCG AGCCGCTGGT GAAATGGGCG GTCGAGGTGA CGAGGCTCGA GGATCTGCCG
CGCATCGTCA GGCGCGCCGC CAAGGTCGCG ACCACGCCGC CGACCGGGCC GGTGTTCATT
TCGCTGCCCG GCGATATCCT CAACGCCGAG GCCGGTATCG ACCTCGGCCG CAGCACGCGG
GTCGATGCGC GGGTGCGGCC GTCCGCTGAT GCTTTGCAGG CGCTGGCACA GCGCATCCTG
CGGGCGCAGC GGCCGGTGAT CATCACCGGC GACGAGATCG TCAAGAGCGA CGCGCTGCAA
GCCGCGGCGG ATTTTGCGTC CGCGCTGGGC GCGCCGGTGC ATCAGCAATC TGCGCCCTAT
GGCGCGCATT TTCTCTCCGA GCATCCCTGC TATATCGGCT CGCTGTCGCG CATCCAGAAG
CAGGTGCGGG ATCTCCTGGC GCCGCATGAC CTCATGATCG TGCTCGGTGC TGATCCGTTG
CGGATGTCCG TGCACAGCGA GATCGAACCG CTGCCCGACG GCCTGGCGAT CGTGCAGATC
GGCCTCGTCG ATTGGGAACT GGGCAAGAAT TTTGGCGCGG AGATCGCGAT CAAGGCCGAT
GTCCGCGAGA CGCTGCTGCA ACTGACGCCG CTGCTACGCG AGCGCGGCGG TGCGGCCCTG
CAGGCCACGG CGCAGGCGCG CACCGCTGAG CTGGCATCGA AGAACTGGAG CGCGCGCCGC
CGCACGCTCG CGGCGCAGAT CGAGACGGCG CGCGAGCGGA TGCCGATCGA TCCCGACTAT
CTGGCCTTGC AGGTCGCGCA GGCCATGCCG GAGCACGGCA TCCTGGTCGA CGAGGGCCTG
ACCTCGGCAC GCTACATGAC GGCGCTGTTT CCCTATCGCG ACCGCTACAA TTATCACGGC
CTCGCCTCGG GCGGCATCGG CTGGGGCCTG CCGGCCGCGG TCGGCGTCAG CCTCGCCAAT
CCCGACCGTC CGGTGGTGTG CTATTCCGGC GACGGCAGTG CGATGTATTC GATCCAGGCG
CTGTGGACCG CGGCCCATCA CAAGCTGCCG CTCTCGGTGG TCATCGTCAA TAATGGCGGC
TACCGCATCA TCAAGCAGCG GCTGTTGTCG TTCCACGGCG ATGACAACTA CATCGGCATG
GATTTCGCTG ACCCGGCGGT GGATTTTGCC GGGCTGGCTC GCTCGCTCGG CTGCGAGGCA
CTGCGCATCA GCGATCCCAG TGAGCTGCAG CCTGTGCTCA CGGACGCATT CCGGCGGCCC
GGCGCCAAGC TGATCGAGGT AATGGTGAGC AATGCGGTGA ATTGA
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| Protein sequence | MKNRTTGRSA FLALLKDEGI THLFGNPGTT ELPIMHALKD HPDLTYVMAM QESLVVAMAD
GFSRASGRLV ACNVHVAPGL GNAMGSLYNA QFTGTPMILT AGQQEQGHGL MEPLLYGPLV
RMAEPLVKWA VEVTRLEDLP RIVRRAAKVA TTPPTGPVFI SLPGDILNAE AGIDLGRSTR
VDARVRPSAD ALQALAQRIL RAQRPVIITG DEIVKSDALQ AAADFASALG APVHQQSAPY
GAHFLSEHPC YIGSLSRIQK QVRDLLAPHD LMIVLGADPL RMSVHSEIEP LPDGLAIVQI
GLVDWELGKN FGAEIAIKAD VRETLLQLTP LLRERGGAAL QATAQARTAE LASKNWSARR
RTLAAQIETA RERMPIDPDY LALQVAQAMP EHGILVDEGL TSARYMTALF PYRDRYNYHG
LASGGIGWGL PAAVGVSLAN PDRPVVCYSG DGSAMYSIQA LWTAAHHKLP LSVVIVNNGG
YRIIKQRLLS FHGDDNYIGM DFADPAVDFA GLARSLGCEA LRISDPSELQ PVLTDAFRRP
GAKLIEVMVS NAVN
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