Gene BBta_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1637 
Symbol 
ID5154025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1713207 
End bp1713905 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID640556596 
Productphage shock protein A, PspA 
Protein accessionYP_001237754 
Protein GI148253169 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA CTGTTCTGAC GCTGTTTCGG GGCACCGTCG CCGTGGCGGA AGAGGAGCTG 
CAGGATCGGA CCGCGCTGGT GATCCTGGAT CAGCAGATGC GTGACGCCGC CGCTGCCGTC
GAGCGCAGCA AGCGGGCGCT GGCGCTGGCG ATTGCGCAGG ACCAGCAGGA GGGCAGGCGC
CTCGAAGCGA CCTTGACGCG GATTGCCGAT CTCGAGGTGC GCGCCACCGC CGCGCTCGAT
GGCGGTCGCG AGGATCTGGC CCGCGAGGCG GCGCAGGCGA TCGCGGGTCT GGAGGCCGAG
CGCGATGCAG CCAAGACGGC ACGGGCGCTG TTCGCCACCG AGATCACCCG GCTGAAGAAG
CATGTGGCGG GCGCCGAGGC GCGCATCGCC GAGCTTGATC GGGGCCGGCG CATCGCGCGT
GCCGCAGAGG CCGTGCGCAA TCTGCGCCGC GGCGGCATCG AGGCGGCGCG GCCCTATGAA
TGTACGCTGC CGGAAGCCGA AGCGACCTTG AAGCGGCTGC GCGAGCGGCA GATGGAGGCA
CAGGCCGCTG ACGAGGCGCT GATGGAGCTG GACGCCGCGA CGGGGCCGAT CACCACGGCC
GAAAAGCTTG CCGAACAGGG CTTTGGCCCG CGCATCAAGA CCACCGCCGA TGACGTGCTG
GCGCGGCTGA AGGCCGGCCG CACCGCTCCG GCCAACTGA
 
Protein sequence
MFKTVLTLFR GTVAVAEEEL QDRTALVILD QQMRDAAAAV ERSKRALALA IAQDQQEGRR 
LEATLTRIAD LEVRATAALD GGREDLAREA AQAIAGLEAE RDAAKTARAL FATEITRLKK
HVAGAEARIA ELDRGRRIAR AAEAVRNLRR GGIEAARPYE CTLPEAEATL KRLRERQMEA
QAADEALMEL DAATGPITTA EKLAEQGFGP RIKTTADDVL ARLKAGRTAP AN