| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1573 |
|---|
| Symbol | |
|---|
| ID | 5152907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1653244 |
|---|
| End bp | 1654431 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640556536 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_001237694 |
|---|
| Protein GI | 148253109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.153836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCC ACGCGGCAGC GCGCACGGCG TTACGTGTTG CCGGTCGCGA GATCATCGTG
GTTCAAGACA ACAGCGAACT GATAATTGGC GGGCGACGCG CGAAAGCCAA TGGATATGGA
CCTGTCGGCA AAGGAGGTGG AACACGTGGG CTGCTGCTGC ATGCGGCGCT CGCGCTTGAT
GCCGAAAATG GTGCATTGCT GGGACTTGTT GATGCGCAGG TTTGGAATCG GGACAAGGGC
AAGGTGACGG CCCGGCGCTC GCGAGCGATA GCAGATAAAG AGTCTCAATA TTGGCTCTCG
ACGGCGACGA AAGCCGGCGA GACTCTATCT GCAGCGCAGA GCATCACCGT CATCTCCGAC
CGGGAAAGCG ATATTTACGA ACACTTCGTG CGACGTCCGC CGAATGTGGA GCTGCTTGTC
CGAGCCAATT GGAACCGGAA GATCAAATTG AAATCCGGGA CTTTTACGAG TCAGTTTGCA
TTCGTCGATG GCCTGCCGGA AGCAGCCCGG TTCAGCGTGA CGATACCTGC AGCTCCGGGC
CGCAAGGAGC GGACGGCCGA GCTTGCCTTG CGCTTCTCAC CCGTAACGCT ATGCAGGCCG
CATCCAAGCC CAGCACCTGA TCTGCCCGAT ACGGTCCGAC TGACCATCGT GGATGTTCGA
GAGGTGTCAT CGACCCATGA CGGCGAGTCG ATCCATTGGC GGCTCCTCAC CACTCACGTC
GTGAGGAGCT CAAAGCAAGC ACGTCGGATT GTCGATCTCT ATCGTAAGCG ATGGACGATC
GAGGAGTTCT TTCGCACGCT CAAATCGGCA GGCTTTGATA TCGAGGAGGC CGACATTGGT
GAGCCAGAAG TCATGATCAA GTTTGTCGCG GCAGCCGCTG TGGCCGCGGT CACCATCATG
CAACTGGTGC GCGCCCGTGA CGGAACCACC GAGGAAAAAT TGATCGAGGC CTTTGACCCC
GACGATCGGC CTGTGCTCGA AGCTCTCTCT GCCGAATTCG AGGGAGCTAC CGAGAAGCAA
AAGAACCCAC ACCGAAAAGG TACGCTTGCC TTCGCTGCAT GGGTCATCGC TCGGCTCGGA
GGATGGACCG CCTACTACGG AAAGCCCGGC CCAATGGTGA TGCGGGTGGG CCTCGAAGCC
TTCCGCCGCA TCAAATACGG CACCACTTTG AGGCTCAAAA ATGTGTGA
|
|---|
| Protein sequence | MASHAAARTA LRVAGREIIV VQDNSELIIG GRRAKANGYG PVGKGGGTRG LLLHAALALD
AENGALLGLV DAQVWNRDKG KVTARRSRAI ADKESQYWLS TATKAGETLS AAQSITVISD
RESDIYEHFV RRPPNVELLV RANWNRKIKL KSGTFTSQFA FVDGLPEAAR FSVTIPAAPG
RKERTAELAL RFSPVTLCRP HPSPAPDLPD TVRLTIVDVR EVSSTHDGES IHWRLLTTHV
VRSSKQARRI VDLYRKRWTI EEFFRTLKSA GFDIEEADIG EPEVMIKFVA AAAVAAVTIM
QLVRARDGTT EEKLIEAFDP DDRPVLEALS AEFEGATEKQ KNPHRKGTLA FAAWVIARLG
GWTAYYGKPG PMVMRVGLEA FRRIKYGTTL RLKNV
|
|---|
| |