Gene BBta_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1538 
Symbol 
ID5152713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1619973 
End bp1620215 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content51% 
IMG OID640556502 
Producttransposase 
Protein accessionYP_001237660 
Protein GI148253075 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.131627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.237147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATT TAGAGAGCCT AAGTCACAGC AAATGGGAGT GCAAATACCA TGTTGTTTTC 
ATTCCCAAGT ACCGCAGGAA GGTGCTGTAC GGCGAGCTGA GGCGGCATCT CGGGGATGTT
TTCCGCAGGT TGGCGTTGCA GAAGGAGTGC AGGGTCGAGG AGGGGCATTT GATGCCCGAT
CATGTTCATA TGATGCTTGA AGTGGACCCC AGATTTGGGA CCAGAAGCAT AGTTGGAATC
TAG
 
Protein sequence
MDDLESLSHS KWECKYHVVF IPKYRRKVLY GELRRHLGDV FRRLALQKEC RVEEGHLMPD 
HVHMMLEVDP RFGTRSIVGI