Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1351 |
Symbol | dcp |
ID | 5152667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1434899 |
End bp | 1436980 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640556333 |
Product | peptidyl-dipeptidase |
Protein accession | YP_001237492 |
Protein GI | 148252907 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.394273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACA CCGCCGCTGT GATCGACGCT CAGACCAACC CGCTGTTGAT GGCCTGGGAG ACCCCGCACC AGACACCACC CTTCGACGCG ATCAGGCCCG AGCACTTCTT GCCGGCCTTC GAGCGCGCCT TTGCCGATCA TACCGCCGAA ATCACCGCGA TGACCCACGA TCCCGCGGAG CCGGACTTCG CCAACACCAT CACGGCACTG GAGCGCTCGG GCAAGCTGCT GTCGAAGGTC GCGGCCGTGT TCTACGACCT CGTTTCGGCG CATTCCAACC CGGCGATCCT GGAGATCGAC AAGGAGGTGT CGCTGCGGAT GGCGCGGCAC TGGAACCCGA TCATGATGAA CGCTGTGCTG TTTGGCCGCA TCGCGCTGCT CTACGACAAC CGCAAGACGC TGACGCTGAC GAGCGAGGAG CAGCGGCTGC TCGAGCGCAC CTACACCCGC TTCCGCCGCG CCGGCGCCGG CCTGAACGAC GAGGCCAAGG CGCGCATGGC CGAAATCAAC GAGCAGCTCG CCCAGCTCGG CACCTCCTTC AGCCATCACG TCCTCGGCGA CGAGCAGGAC TGGTTCCTGG AGCTCGGTGA GGACGACCGC GCCGGCCTCT CCGAGAGCTT CATCGCGGCC GCCAAGGCTG CGGCGGAGGA GCGCGGCATG CCAGGCAAGG CGATCGTGAC CCTGTCGCGC TCCTCGGTCG AGCCCTTCCT GCAGAGCTCG GCGCGCCGCG ACCTGCGCGA GAAGGTGTTC AAAGCGTTCA CTGCCCGCGG CGACAACGGC AATTCCAACG ACAACAACGC CGTCATCGGT GAGATCCTGG CGCTGCGCGA GGAAGCCGCC AAGATCATGG GCTTTCCGAA CTTCGCCGCC TATCGGCTGG AGGACTCGAT GGCGAAGACG CCGGAGGCCG TGCGCGGCCT GCTGGAGCGG GTCTGGAAGC CGGCCCGCGC CAAGGCGCTG GCCGACCGCG ACCAGCTGCA GGAGATGATC ACGGCCGAGG GCGGCAACTT CAGGCTCGAG GCCTGGGACT GGCGCTATTA TGCCGAGAAG CTGCGCCAGG CGAAGGCGAA CTTCGACGAC GCGGCGATCA AGCCCTATTT GTCGCTCGAC AACATGATCG CGGCCGCCTT CGACTGCGCC ACGCGGCTGT TCGGCATCAC CTTTGCCGAG CGCAGCGACA TCCCGGTCTG GCACCCGGAC GTGCGGGTCT GGGAGATCAA GGCGGCCGAT GGCAGCCACA AGGCGCTGTT CTATGGCGAC TACTTCGCCC GGCCGTCGAA GCGCTCCGGC GCCTGGATGA CCTCGCTGCG CGACCAGCAG AAGCTCGACG GCGACATTGC GCCCTTGATC ATCAACGTCT GCAACTTCGC CAAGGGCGCC GACGGCCAGC CGTCGCTGCT GTCGCCGGAC GAAGCCCGCA CCCTGTTCCA CGAGTTCGGC CACGGCCTGC ACGGCATCCT CTCCAACGTC ACTTATCCTT CGCTGTCGGG CACCGCGGTC TTCACGGATT TCGTCGAGCT GCCGTCGCAG CTCTACGAGC ACTGGCAGGA GCGCCCCGAG GTGCTGCAGA CCTTCGCGCG CCATTACCAG ACCGGCGAGC CGCTGCCGCA GGACCTGCTC GACCGCTTCC TGGCGGCGCG TCGCTTCAAC CAGGGCTTTG CCACTGTCGA GTTCGTCTCC TCGGCCCTGA TCGATTTGGA GTTCCACACC CAGCCCGCGG CGGCCTCGAA GGATGTGCGC GCCTTCGAGC AGGCCGAGCT GGAGAAGATC GGCATGCCCA AGGAGATCGC GTTGCGCCAC CGGCCGACCC AATTCGGCCA CATCTTCTCG GGAGACCATT ATGCGGCGGG CTATTACAGC TACATGTGGT CGGAGGTGAT GGATGCGGAT GCCTTCGGTG CCTTCGAGGA CGCCGGCAAC ATCTTCGACC CCGCGGTCGC CAAGCGGCTC CACGACAATG TCTATTCGTC GGGCGGCTCA GTCGATCCGG AAGCGGCCTA TGTCGCCTTC CGCGGCCGGG AGCCCGAGCC GGATGCGCTG CTGCGCCGGC GCGGCCTGCT CGACGTTCCC AAGGCGGCTT GA
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Protein sequence | MSDTAAVIDA QTNPLLMAWE TPHQTPPFDA IRPEHFLPAF ERAFADHTAE ITAMTHDPAE PDFANTITAL ERSGKLLSKV AAVFYDLVSA HSNPAILEID KEVSLRMARH WNPIMMNAVL FGRIALLYDN RKTLTLTSEE QRLLERTYTR FRRAGAGLND EAKARMAEIN EQLAQLGTSF SHHVLGDEQD WFLELGEDDR AGLSESFIAA AKAAAEERGM PGKAIVTLSR SSVEPFLQSS ARRDLREKVF KAFTARGDNG NSNDNNAVIG EILALREEAA KIMGFPNFAA YRLEDSMAKT PEAVRGLLER VWKPARAKAL ADRDQLQEMI TAEGGNFRLE AWDWRYYAEK LRQAKANFDD AAIKPYLSLD NMIAAAFDCA TRLFGITFAE RSDIPVWHPD VRVWEIKAAD GSHKALFYGD YFARPSKRSG AWMTSLRDQQ KLDGDIAPLI INVCNFAKGA DGQPSLLSPD EARTLFHEFG HGLHGILSNV TYPSLSGTAV FTDFVELPSQ LYEHWQERPE VLQTFARHYQ TGEPLPQDLL DRFLAARRFN QGFATVEFVS SALIDLEFHT QPAAASKDVR AFEQAELEKI GMPKEIALRH RPTQFGHIFS GDHYAAGYYS YMWSEVMDAD AFGAFEDAGN IFDPAVAKRL HDNVYSSGGS VDPEAAYVAF RGREPEPDAL LRRRGLLDVP KAA
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