Gene BBta_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1351 
Symboldcp 
ID5152667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1434899 
End bp1436980 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content67% 
IMG OID640556333 
Productpeptidyl-dipeptidase 
Protein accessionYP_001237492 
Protein GI148252907 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.394273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA CCGCCGCTGT GATCGACGCT CAGACCAACC CGCTGTTGAT GGCCTGGGAG 
ACCCCGCACC AGACACCACC CTTCGACGCG ATCAGGCCCG AGCACTTCTT GCCGGCCTTC
GAGCGCGCCT TTGCCGATCA TACCGCCGAA ATCACCGCGA TGACCCACGA TCCCGCGGAG
CCGGACTTCG CCAACACCAT CACGGCACTG GAGCGCTCGG GCAAGCTGCT GTCGAAGGTC
GCGGCCGTGT TCTACGACCT CGTTTCGGCG CATTCCAACC CGGCGATCCT GGAGATCGAC
AAGGAGGTGT CGCTGCGGAT GGCGCGGCAC TGGAACCCGA TCATGATGAA CGCTGTGCTG
TTTGGCCGCA TCGCGCTGCT CTACGACAAC CGCAAGACGC TGACGCTGAC GAGCGAGGAG
CAGCGGCTGC TCGAGCGCAC CTACACCCGC TTCCGCCGCG CCGGCGCCGG CCTGAACGAC
GAGGCCAAGG CGCGCATGGC CGAAATCAAC GAGCAGCTCG CCCAGCTCGG CACCTCCTTC
AGCCATCACG TCCTCGGCGA CGAGCAGGAC TGGTTCCTGG AGCTCGGTGA GGACGACCGC
GCCGGCCTCT CCGAGAGCTT CATCGCGGCC GCCAAGGCTG CGGCGGAGGA GCGCGGCATG
CCAGGCAAGG CGATCGTGAC CCTGTCGCGC TCCTCGGTCG AGCCCTTCCT GCAGAGCTCG
GCGCGCCGCG ACCTGCGCGA GAAGGTGTTC AAAGCGTTCA CTGCCCGCGG CGACAACGGC
AATTCCAACG ACAACAACGC CGTCATCGGT GAGATCCTGG CGCTGCGCGA GGAAGCCGCC
AAGATCATGG GCTTTCCGAA CTTCGCCGCC TATCGGCTGG AGGACTCGAT GGCGAAGACG
CCGGAGGCCG TGCGCGGCCT GCTGGAGCGG GTCTGGAAGC CGGCCCGCGC CAAGGCGCTG
GCCGACCGCG ACCAGCTGCA GGAGATGATC ACGGCCGAGG GCGGCAACTT CAGGCTCGAG
GCCTGGGACT GGCGCTATTA TGCCGAGAAG CTGCGCCAGG CGAAGGCGAA CTTCGACGAC
GCGGCGATCA AGCCCTATTT GTCGCTCGAC AACATGATCG CGGCCGCCTT CGACTGCGCC
ACGCGGCTGT TCGGCATCAC CTTTGCCGAG CGCAGCGACA TCCCGGTCTG GCACCCGGAC
GTGCGGGTCT GGGAGATCAA GGCGGCCGAT GGCAGCCACA AGGCGCTGTT CTATGGCGAC
TACTTCGCCC GGCCGTCGAA GCGCTCCGGC GCCTGGATGA CCTCGCTGCG CGACCAGCAG
AAGCTCGACG GCGACATTGC GCCCTTGATC ATCAACGTCT GCAACTTCGC CAAGGGCGCC
GACGGCCAGC CGTCGCTGCT GTCGCCGGAC GAAGCCCGCA CCCTGTTCCA CGAGTTCGGC
CACGGCCTGC ACGGCATCCT CTCCAACGTC ACTTATCCTT CGCTGTCGGG CACCGCGGTC
TTCACGGATT TCGTCGAGCT GCCGTCGCAG CTCTACGAGC ACTGGCAGGA GCGCCCCGAG
GTGCTGCAGA CCTTCGCGCG CCATTACCAG ACCGGCGAGC CGCTGCCGCA GGACCTGCTC
GACCGCTTCC TGGCGGCGCG TCGCTTCAAC CAGGGCTTTG CCACTGTCGA GTTCGTCTCC
TCGGCCCTGA TCGATTTGGA GTTCCACACC CAGCCCGCGG CGGCCTCGAA GGATGTGCGC
GCCTTCGAGC AGGCCGAGCT GGAGAAGATC GGCATGCCCA AGGAGATCGC GTTGCGCCAC
CGGCCGACCC AATTCGGCCA CATCTTCTCG GGAGACCATT ATGCGGCGGG CTATTACAGC
TACATGTGGT CGGAGGTGAT GGATGCGGAT GCCTTCGGTG CCTTCGAGGA CGCCGGCAAC
ATCTTCGACC CCGCGGTCGC CAAGCGGCTC CACGACAATG TCTATTCGTC GGGCGGCTCA
GTCGATCCGG AAGCGGCCTA TGTCGCCTTC CGCGGCCGGG AGCCCGAGCC GGATGCGCTG
CTGCGCCGGC GCGGCCTGCT CGACGTTCCC AAGGCGGCTT GA
 
Protein sequence
MSDTAAVIDA QTNPLLMAWE TPHQTPPFDA IRPEHFLPAF ERAFADHTAE ITAMTHDPAE 
PDFANTITAL ERSGKLLSKV AAVFYDLVSA HSNPAILEID KEVSLRMARH WNPIMMNAVL
FGRIALLYDN RKTLTLTSEE QRLLERTYTR FRRAGAGLND EAKARMAEIN EQLAQLGTSF
SHHVLGDEQD WFLELGEDDR AGLSESFIAA AKAAAEERGM PGKAIVTLSR SSVEPFLQSS
ARRDLREKVF KAFTARGDNG NSNDNNAVIG EILALREEAA KIMGFPNFAA YRLEDSMAKT
PEAVRGLLER VWKPARAKAL ADRDQLQEMI TAEGGNFRLE AWDWRYYAEK LRQAKANFDD
AAIKPYLSLD NMIAAAFDCA TRLFGITFAE RSDIPVWHPD VRVWEIKAAD GSHKALFYGD
YFARPSKRSG AWMTSLRDQQ KLDGDIAPLI INVCNFAKGA DGQPSLLSPD EARTLFHEFG
HGLHGILSNV TYPSLSGTAV FTDFVELPSQ LYEHWQERPE VLQTFARHYQ TGEPLPQDLL
DRFLAARRFN QGFATVEFVS SALIDLEFHT QPAAASKDVR AFEQAELEKI GMPKEIALRH
RPTQFGHIFS GDHYAAGYYS YMWSEVMDAD AFGAFEDAGN IFDPAVAKRL HDNVYSSGGS
VDPEAAYVAF RGREPEPDAL LRRRGLLDVP KAA