| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1314 |
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| Symbol | |
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| ID | 5148895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1399944 |
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| End bp | 1402475 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640556298 |
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| Product | putative TonB-dependent receptor protein |
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| Protein accession | YP_001237457 |
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| Protein GI | 148252872 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.711074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAGG CAGTCTTTCC AAGGAGCTTG CGCGGGGCAA GCGGACACGA ATGGGATCCG
TCCTCCGATA TTTCCGGAGT GAAGGTCTCG GCCGTGGCCA GCCTGATCGC GGTTGCCTCG
TTCTCGAGTG CCGAAGCCCA GCAGGCGCCG CTGCCCTCCG TCACCGTCGA AGCCCCGGTC
GCCCGTCCGA AGCCTGCCGC CTCCCGTCCG ACCGCTGAGC AGGTGCGCGC CCGCGACGCG
ATGCGCCGCG CCGCCCGCCA GCAACAGCAG CAGCAGGTCG CCGCGCCCAA GAGCAACCTG
CCGCCCGACC GCAACCCCTA TTCGAGCCCC GCGTCGGACT ACAAGGGCGA GCGGCTGCAG
GCCTCCGGCA AGTTTCCGGA GAAGCTGCTC AACACCCCGA AGACCGTGAC CGTGCTGAGC
AAGGAGATCC TCGCCGACAA GAACTCGACC AGCCTCAAAT CCGCCGTGCT CTCCACCGCC
GGCGTGACGC TCGGCACCGG CGAAGGCGGC AACGCGTTCG GCGACCGCTT CTTCATTCGC
GGCTTCGACG CCCGCAACGA CGTTTTCATC GACGGCGTGC GTGACGGCGG CGTGTCGGTG
CGCGAGAACT TCTTCACCGA GCAGGTCGAG ATCCTGCGCG GCCCGGCCTC GTCCTTTGCC
GGCCGCGGCA CCACCGGCGG CGCCATCAAC ATCGTGACCA AGCAGGCCAC GACCGAAAGC
AGCTTCTACA ACATGGACAC CACGCTCGGT ACCGACAAGA CCAAGCGCGT GGTGATCGAC
GTCAACCAGA AGATCACTCC GACCTTCGCC GCACGCGTCG GCGGCCTGTT CCAGGACGCG
GGCGTGGCCG GGCGCGACTT CGTGACCGAC AACCGCAATG GCGGCTTCAT CGCGACCAAA
TGGACGCCGC TCGACACCGT GACGCTGGCG GCCAACTACA TCCACAGCGA GGTCACCGGA
CGTCCCGACT TCGGCGTGCC CTATTGGCGG CCGAACAATC TCGTGGCCGG CGCGCCGTTC
CCGGAGGTGG GCTCACCGCG CAACGCCTGG TACGGCTTCG TCAACCGCGA CTTCTCGCGC
ATCGGCCAGG ACATCGGCAC ATTGAATGCC GAGGTGAAGG TCACACCCGA CCTGACGATC
TCCGACAAGT TCCGGGTGTC ACGCTCGACC CTCAACTACA TCGGCACGCT GCCGGAAGGT
CCGACGCTCA CCAATCCGCT GTCGAACTCG ACGATCCGGG CCAACCCGCA GAGCCGCTTC
CAGCAGACCG ACGTGCTCGC CAACCAGCTC GAGGCGACCT ACAAGTTCGA TACCGGCGCG
TTCCGGCATA CCCTGCTCGC CGGGCTCGAA GTCTCGCAGG AAAAGGCGCT CATCAACAGC
TACACCGGCC TGACCTCCGA GCAGCAGGGC CTTGCCTTCG CCGGCAACGG TTCGCTGTCC
GGCGTGAGCG TGTTCAGTCC GAGCGCAACC TTCGCACCGT TCGGCATTCC CTCGCTCGGC
CAGTTCCCGA CCAATGTGAA GATCGACACG GCGAGCGTCT ATGCGCTCGA CAGCGTCAAC
TACCGCGATC TGGTGATCCT CAACGGCGGC ATCCGCTACG ACAAATACGA CGTCCGGGTC
GATGGCTTCG GCACGGTCAA CGGTGTCGCC AACACGCCGG GCTCGACGGC GGCCTCGAGC
GGCATGCCGA ACTTCAACGT CGGACTGACC CTGAAGCCGG TGCCCTATGC CAGCTTCTAC
GCGGCCTATG CGACGTCGTC GAACCCCGTC GGCGCGGAGT TCGACGGTCT GAGCTCGCAG
TATGGCGGCC TGTCGGCCGT GACCAATGGC GGCGCCAACC AGGTGTTCGG CCCCGAGAAG
AACACCTCGA TCGAGATCGG CACCAAATGG GAGCTGCTTG ACGGACGCCT GCTGGTCACC
GGCGCCCTGT TCCAGACCGA GAAGGAGAAT GCCCGCGAGT CGCGCAACAT CGCGAACGCC
ACGCAGGCCA CCGCTGATTG TCCCTATCCC GTGGGCACCA CCGGCAACGT GCCGTGCCTT
TCGGCCGGCG CAGCCTACCG CATCCGCGGC ATCGACCTGC AGGCGGGCGG CAAGCTCACC
GACAAATGGA GCATTTTCGG CGGCATCGTG CTGATGCAGT CCGAGGTGAC GAAGTCGAAC
ATCCCGCCGG CGAACACGGC GCTGTTCACC AGCAATGTCG GCCTGCAGCT CGCCAACACC
GCGCACCAAT CCTTCAGCCT GCTGACGAAG TACCAGATCA ACGATACCTG GGAGATCGGC
GGTCAGGCGG TGTACCGGTC GAAGATCTTC GGCGGCACCT GGCTCGCCGC GAACCAGGGC
ACCGAGCTGC CGAGCTATTG GCGCTTCGAT GCTTTCGCGG AAGCCAAGCT CGACAAGAAC
TGGACCGCGA AGGTGTTCGT TGCCAACATC TTCAACAAGC TCTACTACGA CGCCTTCTAT
CAGAGTGCCA CGCCGTTCAC CCTGGTCGGT CCGGGACGAA GCGCATCGAT CGTCCTGTCC
GGACGGTTCT GA
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| Protein sequence | MGKAVFPRSL RGASGHEWDP SSDISGVKVS AVASLIAVAS FSSAEAQQAP LPSVTVEAPV
ARPKPAASRP TAEQVRARDA MRRAARQQQQ QQVAAPKSNL PPDRNPYSSP ASDYKGERLQ
ASGKFPEKLL NTPKTVTVLS KEILADKNST SLKSAVLSTA GVTLGTGEGG NAFGDRFFIR
GFDARNDVFI DGVRDGGVSV RENFFTEQVE ILRGPASSFA GRGTTGGAIN IVTKQATTES
SFYNMDTTLG TDKTKRVVID VNQKITPTFA ARVGGLFQDA GVAGRDFVTD NRNGGFIATK
WTPLDTVTLA ANYIHSEVTG RPDFGVPYWR PNNLVAGAPF PEVGSPRNAW YGFVNRDFSR
IGQDIGTLNA EVKVTPDLTI SDKFRVSRST LNYIGTLPEG PTLTNPLSNS TIRANPQSRF
QQTDVLANQL EATYKFDTGA FRHTLLAGLE VSQEKALINS YTGLTSEQQG LAFAGNGSLS
GVSVFSPSAT FAPFGIPSLG QFPTNVKIDT ASVYALDSVN YRDLVILNGG IRYDKYDVRV
DGFGTVNGVA NTPGSTAASS GMPNFNVGLT LKPVPYASFY AAYATSSNPV GAEFDGLSSQ
YGGLSAVTNG GANQVFGPEK NTSIEIGTKW ELLDGRLLVT GALFQTEKEN ARESRNIANA
TQATADCPYP VGTTGNVPCL SAGAAYRIRG IDLQAGGKLT DKWSIFGGIV LMQSEVTKSN
IPPANTALFT SNVGLQLANT AHQSFSLLTK YQINDTWEIG GQAVYRSKIF GGTWLAANQG
TELPSYWRFD AFAEAKLDKN WTAKVFVANI FNKLYYDAFY QSATPFTLVG PGRSASIVLS
GRF
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