Gene BBta_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1287 
Symbol 
ID5149491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1367768 
End bp1368292 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content72% 
IMG OID640556274 
Productputative general secretion pathway protein N, GspN 
Protein accessionYP_001237433 
Protein GI148252848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.371415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCTG CCCCCATCGA CGGCCATGTC GGACAGGCGG CCGCCGATCC GGAGCGCGCC 
GCCGTGGCAC CGCAAGCGAT CTCGGCGGCG ACGAGCGCCA ATCCGCTGTG GGAGGTTCCG
ATCGGTGCGC TGCCGGCGAC GCGTGAGCGG CCGATCTTCT CGGCTTCGCG CCGGCCGCCT
CCACAGGTCG CCGCGCCGGT GATGGTCATG CGCGCGGCGC CGCCGCCTCC GCCGCCGGAG
CCGGAACGGC CGAACCTGCA GCTCGTTGGC ACGGTGATCG GCGACGAGGA AAGCTTTGGC
ATCTTCGTCG ATCCATCCTC GCAACTACCG CTGCGCCTGC GGATCGGGGC TGCGCATGAA
GGGTGGCGGC TCGAGGCGCT GAAGCCGCGC GAGGCCGTCC TGCGGAAGGA TGGTGAAACG
GTGATCCTGC CGATGCCGCA ACTGGGACAG AGCGCAGACG ACGACAGCGA TCCGGTCCCT
GCGCCGCCAT CGGCGCGCGC GCGCATGGCG CGGCGGTCGC GCTGA
 
Protein sequence
MNAAPIDGHV GQAAADPERA AVAPQAISAA TSANPLWEVP IGALPATRER PIFSASRRPP 
PQVAAPVMVM RAAPPPPPPE PERPNLQLVG TVIGDEESFG IFVDPSSQLP LRLRIGAAHE
GWRLEALKPR EAVLRKDGET VILPMPQLGQ SADDDSDPVP APPSARARMA RRSR