| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1147 |
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| Symbol | lysA |
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| ID | 5153817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1220405 |
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| End bp | 1221670 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640556135 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001237302 |
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| Protein GI | 148252717 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATT TCGACTACCG CGACGGCGTG CTGCACGCCG AGGCCGTCAA TCTCGCCGGG
CTCGCCGCCC AGGTCGGCAC GCCGTTCTAC TGCTACTCCA CCGCCACTTT GGAGCGGCAC
TATCGCGTGT TCGCCGAGGC CTTCACCGGC CAGGACGTGC TGATCTGCTA CGCGATGAAG
GCCAATTCCA ACCAGTCGGT GCTGCGCACC CTGGCCAAGC TCGGCGCCGG CGCCGACGTC
GTCTCCGGCG GCGAACTGAA GCGCGCGCTG GCGGCCGGCA TCCCCGCGCG CAAGATCGTG
TTCTCCGGCG TCGGCAAGAC CGAGGCCGAG CTGCGCGCCG CGCTCGCGGC CGACATCCAC
TGCCTCAATA TCGAGTCCGA GCCGGAGCTC GACCTCCTGG CGCGGCTTGC CAATGAGACT
GGCCACACCG CCCGCATCTC GGTGCGCGTC AATCCGGACG TCGATGCCGG CACGCACGCC
AAGATCTCGA CCGGCAAGTC GGAGAACAAG TTCGGCATTC CCTTGGAGCA CGCCCGCAAG
GTCTACGCCC GCGCCGCCAA GATGAAGGGC ATCGAGGTCA CCGGCGTCGA CGTCCATATC
GGCAGCCAGA TCACCGATCT CGGCCCCATG GAGACTGCCT TCCGCATCCT CGCCGAGTTC
GTGCAGACGC TGCGCGCCGA CGGCCACACG ATCAGCCACG TCGATTTCGG CGGCGGCCTC
GGCATCCCCT ATCACATGGA CCGCGCGGTG CCGCCGGAGC CCGCCGCCTA TGCCGCGATG
GTCAAGCGCG TCTCGCACAA TCTCGGCTGC ACGCTGATGT TCGAGCCCGG CCGCATGATT
GTCGGCAATG CTGGCATCCT CGTCGCCAAG GTGATCTATG TGAAGCATGG CGAAGCCAAG
AACTTCGTCA TCATCGACGC CGCGATGAAC GATCTGATCC GCCCGACGCT CTACGAGGCG
CATCACGATA TCCTGCCCGT GATCCAGCCC GCGCCGAATG CGCCCGCATT CGTGGCCGAC
GTCGTCGGCC CGGTCTGCGA AAGCGGCGAC TACCTCGCGC TCGACCGCAC GCTGCCCGAG
CCCCGGCCGG GCGACCTCCT CGCCATCATG ACATCAGGTG CCTACGGCGC CGTGCAGGCC
TGCACCTACA ACACCCGCGC TTTGGTACCG GAGGTTCTGG TCAAGGGCGA CCAGTCCGCC
GTGATCCGCC CGCGCATCGA GGTCGAGCAG CTGATCGCGA TGGATACGCC GGCGCCGTGG
CTGTGA
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| Protein sequence | MNHFDYRDGV LHAEAVNLAG LAAQVGTPFY CYSTATLERH YRVFAEAFTG QDVLICYAMK
ANSNQSVLRT LAKLGAGADV VSGGELKRAL AAGIPARKIV FSGVGKTEAE LRAALAADIH
CLNIESEPEL DLLARLANET GHTARISVRV NPDVDAGTHA KISTGKSENK FGIPLEHARK
VYARAAKMKG IEVTGVDVHI GSQITDLGPM ETAFRILAEF VQTLRADGHT ISHVDFGGGL
GIPYHMDRAV PPEPAAYAAM VKRVSHNLGC TLMFEPGRMI VGNAGILVAK VIYVKHGEAK
NFVIIDAAMN DLIRPTLYEA HHDILPVIQP APNAPAFVAD VVGPVCESGD YLALDRTLPE
PRPGDLLAIM TSGAYGAVQA CTYNTRALVP EVLVKGDQSA VIRPRIEVEQ LIAMDTPAPW
L
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