Gene BBta_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1124 
Symbol 
ID5153193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1197441 
End bp1198064 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content73% 
IMG OID640556112 
Productclass I peptide chain release factor domain-containing protein 
Protein accessionYP_001237279 
Protein GI148252694 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR03072] putative peptide chain release factor H 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGC TCCTTCTCAC GGCGGGGCGC GGTCCCGCCG AGTGCAGGCT CGCGGTCGCG 
CATGCACTCC AAGCGCTCGC AGCCGAAGCC GATGCAGCGG ATTGCGATTG CGCGATCGCT
CAAAACGAGG CGGACCGGCT CGGCCCGGCC AGCGCGATCG TCGTGCTCGA TGGACCTCTC
GCGGACCAGA TCGCGCAGCG CTGGACGCAG GGCCCGCTGC TCTGGGTGTG CCGCAGTCCG
CTGCGGCCGC ATCACGGCCG CAAGAACTGG TTCGTCGGCA TCGTCGATCT GCCGCTGCCG
CACCAGGTGC CGGACCTCGC GGCCGCCGAC GTCAGGTGCG AGAGCTTTCG CGCCGGCGGG
CCCGGCGGCC AGCACCAGAA CAAGACGGAG AGCGCTGTGC GCGCCATCCA CCTGCCGACC
GGGCTCACCG CAATCGCGCG CGACGGCCGC TCCCAGCATC GCAACCGAGC GCTGGCGCTC
ACGCGCCTTG CCGCGTTGCT GGACGGCCGC GCGCGCCTGG CCGAGGCCGG CGAAGCGCGG
CTGGTCCACG CCGCGCATGA TCGCGTCCAG CGCGGCGCCG CGGGCCTGCG CTTCGAAGGT
CCGGCGTTCA GAGCGGTTGA ATGA
 
Protein sequence
MRRLLLTAGR GPAECRLAVA HALQALAAEA DAADCDCAIA QNEADRLGPA SAIVVLDGPL 
ADQIAQRWTQ GPLLWVCRSP LRPHHGRKNW FVGIVDLPLP HQVPDLAAAD VRCESFRAGG
PGGQHQNKTE SAVRAIHLPT GLTAIARDGR SQHRNRALAL TRLAALLDGR ARLAEAGEAR
LVHAAHDRVQ RGAAGLRFEG PAFRAVE