Gene BBta_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1019 
Symbol 
ID5150759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1058726 
End bp1059535 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID640556013 
Producthypothetical protein 
Protein accessionYP_001237181 
Protein GI148252596 
COG category 
COG ID 
TIGRFAM ID[TIGR02925] peptidyl-prolyl cis-trans isomerase, EpsD family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.679888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATGCA GCAAGAAGGC CGAGGAGAAG GCCGACGTGG CGAAGAGCCA GATCGTCGCG 
CGTCTCGGCG AGGATGTCGT CACCACGCAG GAGCTCGACA ATGAGTTTCG CGTCGCTCAG
GTGCCCGCCG ACAAGCGCAA GGATCCCGCG GTGGTCCGGC AGGTGCTCGG AGAGCTGGTG
TCGCGGAAAT ATCTCGTCCG CCAGGCCCTG GATGCCAAGC TCGACCGTGA GCCGACCGTT
CTGCTCGATC TGCTGCGCGC GCGCGAGACG GTTCTTGCCA AGGCGGCGGC TTCACGCGAA
GTGGCCAAGA AGAGCTCGGC CATCGTGGGA AGCGATGTCG ACGCCTATAT CAGCAGCAAT
CCGATGAAAT TCGCCAACCG CCAGGTTGCC TCTATCGAGC AGATCGTGGT GCCGACCAAT
GCGGCCTCGC AGGATGTGTT CGAGGCGACA CGCGAGATGA AGTCGCTCGA CGAGGTGGCG
CAGAAGCTGA CGGCGCTCGG AATCGCTCAT TCGCGCTCCA CGGGAGCCCT GAGCAGCGCC
GATATCCCGG CTGATGTGTT CGATCGCATC AGGCAGCGTC AAGCGGATGA TATCTTCCTG
CTGCGGGGCC AGCCGAACAG CGTGTTCTTC AAGGTCAACA CGGTCGAGAC CAGGCCGCTC
GAGGGTGAGG CCGCAGCCCG GCTGGCGCGT CAGGCCATGC AGGTCGATCT CGCAAGGTCG
GAGGCGAGCC TGGCGTCCGT CGAGGCCGTG CTGGCGGCCA AATACGAAGG CGACTATGCC
GAGATCATGA AGATTCAGGC TCCCAAATGA
 
Protein sequence
MGCSKKAEEK ADVAKSQIVA RLGEDVVTTQ ELDNEFRVAQ VPADKRKDPA VVRQVLGELV 
SRKYLVRQAL DAKLDREPTV LLDLLRARET VLAKAAASRE VAKKSSAIVG SDVDAYISSN
PMKFANRQVA SIEQIVVPTN AASQDVFEAT REMKSLDEVA QKLTALGIAH SRSTGALSSA
DIPADVFDRI RQRQADDIFL LRGQPNSVFF KVNTVETRPL EGEAAARLAR QAMQVDLARS
EASLASVEAV LAAKYEGDYA EIMKIQAPK